PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pp3c23_8710V3.1.p

Organism

Physcomitrella patens

Taxonomic ID

3218

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella

Family

G2-like

Protein Properties

Length: 148aa MW: 17013.5 Da PI: 9.6439

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pp3c23_8710V3.1.p	genome	COSMOSS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	38.9	2e-12	21	65	3	47
G2-like 3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvk 47 +++Wt LH+ F+ av+ GG+ kAt k+i ++++ + Lt+++ k Pp3c23_8710V3.1.p 21 KIKWTLGLHHTFLCAVNYFGGKSKATSKRIPQHVNFPELTIAQFK 65 799**************************************9877 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	6.0E-10	16	65	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	7.5E-8	21	64	IPR006447	Myb domain, plants

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 148 aa Download sequence Send to blast
MVEYQREASN VRPYVRSSMY KIKWTLGLHH TFLCAVNYFG GKSKATSKRI PQHVNFPELT 60 IAQFKPEFKR ISIQKWPNFC REAREVYLAL QLLKEGFTGG SNTEPMLETR NAAIQILDPN 120 ETSDPERMQL HNTGPHDKYM PSAWSPP*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2K1IIK1	1e-108	A0A2K1IIK1_PHYPA; Uncharacterized protein
STRING	PP1S10_167V6.1	3e-57	(Physcomitrella patens)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	1e-10	G2-like family protein

Link Out ? help Back to Top
Phytozome	Pp3c23_8710V3.1.p