PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c24_10470V3.5.p
Organism
Physcomitrella patens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 440aa    MW: 47990 Da    PI: 6.9001
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c24_10470V3.5.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1353.1e-11262304547
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                         kr++r   NR +A+rsR RK+++i eLe+ v +L++e ++++ 
  Pp3c24_10470V3.5.p 262 KRAKRILANRQSAQRSRVRKLQYISELERSVTALQSEVSTMAP 304
                         9************************************998875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.7E-13258322IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.232260307IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.37E-10262315No hitNo description
PfamPF001702.7E-9262304IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-11262314No hitNo description
CDDcd147039.76E-24263314No hitNo description
PROSITE patternPS000360265280IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009555Biological Processpollen development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MATQAGQMEG RAMDRAFPMN SSHLPPKSPG SYPSFGVSPV DSSAAGRTNI PSRVGNHKRT  60
PSAGFPPKSQ LNWTDGVVDA PESISLKRGA HRRSASESMA FMDGTNFAKM VDDNVTEEDH  120
ESRSVASIHS ECGSLDFDRL DEDQLISMFD DDAKLHRKPQ HHQQLFTRNV SANNPGGTSG  180
SDTWASERSQ TPPSTKQSES ATPSDSNSVS DVSNEDPKGG FGKYKSEPDV QSSGDLEGGT  240
QTLSKGELQQ ALAGLDSSLD PKRAKRILAN RQSAQRSRVR KLQYISELER SVTALQSEVS  300
TMAPQVAFFE HRRAVLNVDN NTIKQKMAAL AQGQRFKDAH IEALQKEVQR LRQLYQQQQM  360
QQQQHLQPGL STSTYDLQHQ QFSNLELGQD ESSLAAVPDI FASALGIGSE TMSSGSLSPT  420
HSRKRALPHS LNTMVASIW*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024364132.10.0basic leucine zipper 34-like isoform X1
RefseqXP_024364133.10.0basic leucine zipper 34-like isoform X1
RefseqXP_024364134.10.0basic leucine zipper 34-like isoform X1
RefseqXP_024364135.10.0basic leucine zipper 34-like isoform X1
RefseqXP_024364136.10.0basic leucine zipper 34-like isoform X1
RefseqXP_024364137.10.0basic leucine zipper 34-like isoform X1
RefseqXP_024364138.10.0basic leucine zipper 34-like isoform X1
TrEMBLA0A2K1IG940.0A0A2K1IG94_PHYPA; Uncharacterized protein
STRINGPP1S16_138V6.10.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.26e-50bZIP family protein