PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c6_7520V3.3.p
Organism
Physcomitrella patens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 535aa    MW: 58355.7 Da    PI: 9.8608
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c6_7520V3.3.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.22.4e-10317358546
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                       k+++r   NR +A+rsR RK+++i eLe+ v +L+ e +++ 
  Pp3c6_7520V3.3.p 317 KKAKRILANRQSAQRSRVRKLQYISELERSVNALQVEVSTMT 358
                       899********************************9988775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-11313384IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.967315361IPR004827Basic-leucine zipper domain
PfamPF001703.7E-9317360IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.29E-10317371No hitNo description
Gene3DG3DSA:1.20.5.1707.5E-11317382No hitNo description
CDDcd147034.56E-22318369No hitNo description
PROSITE patternPS000360320335IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 535 aa     Download sequence    Send to blast
MDGTSSGKGD GRQVNWSHPM SSSSHLPPKS PGGYSMFGSG SSLFESDLLA TLPLRGGGHH  60
KRTPSAGYLP NVAPTWLEEI LESPDGEVVV RKGSHRRSSS DSVAFLDTPQ DFANFVENVT  120
EEEFILREPP PPIARPNHRR GLSADYQSSQ YDVPPPQRPS HRRGMSADYN NNRLDKEQLM  180
SVLSELEPFQ TQLPRHRSDK PIPRVGGPLP VTRPASSGDS WSIEKWKKHV TLSVPSSTSD  240
SPSYERGKNL KSSVTTSENR STGSDSNSHS DESNDELQSG SVRRGKIEQD AQSKKEVDGS  300
RQAHGDGTEV DPSLDPKKAK RILANRQSAQ RSRVRKLQYI SELERSVNAL QVEVSTMTPQ  360
VGFYDHRRAF LTAENVLLKQ KLAALSQSQR YKEAQNESLK KEVQRLLQIF NQQNQSQQQI  420
QVVQHRPLSP NAYDIPQQFS KLDLGPSIPK PKSPDLYSSG GGGKTSTELA SSLFAGGVAS  480
SLIRSGSNVI RPPSQSAKGV VSSSCMVSSS GKSLEGRMMG GSGTLSSDFM VHNS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024378642.10.0basic leucine zipper 61-like isoform X1
RefseqXP_024378643.10.0basic leucine zipper 61-like isoform X1
RefseqXP_024378644.10.0basic leucine zipper 61-like isoform X1
RefseqXP_024378645.10.0basic leucine zipper 61-like isoform X1
RefseqXP_024378646.10.0basic leucine zipper 61-like isoform X1
TrEMBLA0A2K1KER30.0A0A2K1KER3_PHYPA; Uncharacterized protein
STRINGPP1S282_2V6.20.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.25e-35bZIP family protein