PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c6_7520V3.4.p
Organism
Physcomitrella patens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 392aa    MW: 42803.7 Da    PI: 10.297
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c6_7520V3.4.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.91.4e-10174215546
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                       k+++r   NR +A+rsR RK+++i eLe+ v +L+ e +++ 
  Pp3c6_7520V3.4.p 174 KKAKRILANRQSAQRSRVRKLQYISELERSVNALQVEVSTMT 215
                       899********************************9988775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-11170241IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.967172218IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-8174241No hitNo description
PfamPF001703.2E-9174217IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.96E-11174228No hitNo description
CDDcd147033.85E-21175226No hitNo description
PROSITE patternPS000360177192IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    Send to blast
MGVVSSQYDV PPPQRPSHRR GMSADYNNNR LDKEQLMSVL SELEPFQTQL PRHRSDKPIP  60
RVGGPLPVTR PASSGDSWSI EKWKKHVTLS VPSSTSDSPS YERGKNLKSS VTTSENRSTG  120
SDSNSHSDES NDELQSGSVR RGKIEQDAQS KKEVDGSRQA HGDGTEVDPS LDPKKAKRIL  180
ANRQSAQRSR VRKLQYISEL ERSVNALQVE VSTMTPQVGF YDHRRAFLTA ENVLLKQKLA  240
ALSQSQRYKE AQNESLKKEV QRLLQIFNQQ NQSQQQIQVV QHRPLSPNAY DIPQQFSKLD  300
LGPSIPKPKS PDLYSSGGGG KTSTELASSL FAGGVASSLI RSGSNVIRPP SQSAKGVVSS  360
SCMVSSSGKS LEGRMMGGSG TLSSDFMVHN S*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024378647.10.0basic leucine zipper 61-like isoform X2
TrEMBLA0A2K1KER30.0A0A2K1KER3_PHYPA; Uncharacterized protein
STRINGPP1S282_2V6.20.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.27e-36bZIP family protein