PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c8_11470V3.5.p
Organism
Physcomitrella patens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 465aa    MW: 50216.1 Da    PI: 6.8051
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c8_11470V3.5.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.54.4e-11267309547
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                        kr++r   NR +A+rsR RK+++i eLe+ v +L++e ++++ 
  Pp3c8_11470V3.5.p 267 KRAKRILANRQSAQRSRVRKLQYISELERSVTALQSEVSTMAP 309
                        9************************************998875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.7E-13263327IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.266265328IPR004827Basic-leucine zipper domain
PfamPF001702.8E-9267308IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.27E-10267320No hitNo description
Gene3DG3DSA:1.20.5.1702.4E-11267319No hitNo description
CDDcd147038.05E-25268319No hitNo description
PROSITE patternPS000360270285IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    Send to blast
MATQASPTEG HAVDWSFPMS SSHLPPKSPG SFPNFGAGPL DPSAAARTSM PSRVGNHKRT  60
PSAGYVPQTQ ATRMEGIVDA ADSGLFKRGA HRRSASESMA LMDGINFAKM VDDNLTEDDD  120
FESRSVASMH SGGHSGSGSI DFDRFDEDQL LSMFGNDSEP HQKQQQQRQE STRNSSANNP  180
GGSSGSDTWA SGRAHTPPGT KQNDPSTPSD SNSVSDVSNE DPKGGLEKYK SEPDIQSSGD  240
HEGATQTFSK GELQQALAGL DSSLDPKRAK RILANRQSAQ RSRVRKLQYI SELERSVTAL  300
QSEVSTMAPQ VAFFEHRRAV LNVDNNTMKQ KMATLAQGQH FKDAHNEALQ KEVQTLRQLY  360
HQMQQQRLQT GAPTSVYDLQ HQQFSKLDVG AAHQDDSSLA AVPDIFASGF GVGSDMTTSG  420
STSPTHCRTR SLPYSLNTMV ASTWLKTTSP KVSLDTGHSL IPKH*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppa.131630.0protonema
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024383474.10.0basic leucine zipper 61-like
RefseqXP_024383475.10.0basic leucine zipper 61-like
RefseqXP_024383476.10.0basic leucine zipper 61-like
RefseqXP_024383477.10.0basic leucine zipper 61-like
TrEMBLA0A2K1K6T60.0A0A2K1K6T6_PHYPA; Uncharacterized protein
STRINGPP1S62_67V6.10.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.25e-39bZIP family protein