PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3c9_6339V3.2.p
Organism
Physcomitrella patens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bZIP
Protein Properties Length: 357aa    MW: 39619.2 Da    PI: 6.9945
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3c9_6339V3.2.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.12.9e-16273324253
                       XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                       +++kr++r+ +NRe+ArrsR+RK+  +  Le+ v++L  eN  L ++l+  +
  Pp3c9_6339V3.2.p 273 RDIKRAKRMLSNRESARRSRRRKQTHLSILETQVAQLRVENGNLVQKLQDFN 324
                       689*****************************************99998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.6E-14272350IPR004827Basic-leucine zipper domain
PfamPF001703.5E-14273325IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.369274326IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-10276326No hitNo description
SuperFamilySSF579592.6E-11276326No hitNo description
PROSITE patternPS000360279294IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
MEHSPSVDNL LDIFWDVSVN FADKAVTSLS IDQRAPEWSF QEFFKESLTA TPGLGPSRPA  60
CKSRFLIDHA DVKEGKPEKQ DVKESHRSMG TGADKEPLIS SGDLQMYPHS GSSDFSTFMV  120
TRSEDVRIVD DDDPCDAVEG ALNPFFCGFP DVSEGSAAHA RMSGTTIELN REDGFRNPQE  180
YECFLKHKLE IACAAVAITQ HAKASGTRAA EANVKRAEPV SKNHKPGTRA LKRKSPTGDT  240
SVAEVGKSRP ITSSSEVSED EEYGEQHGKE APRDIKRAKR MLSNRESARR SRRRKQTHLS  300
ILETQVAQLR VENGNLVQKL QDFNHKFHEA AIDHRILKAD CEALRAKMNQ INSSNR*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1288295RRSRRRKQ
2290295SRRRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024385347.10.0bZIP transcription factor RISBZ2-like isoform X2
TrEMBLA0A2K1K2910.0A0A2K1K291_PHYPA; Uncharacterized protein
STRINGPP1S220_102V6.10.0(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.32e-27bZIP family protein