PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pp3s32_270V3.1.p
Organism
Physcomitrella patens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physcomitrella
Family bHLH
Protein Properties Length: 506aa    MW: 56080.4 Da    PI: 8.8814
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pp3s32_270V3.1.pgenomeCOSMOSSView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.30.00066376399830
                       HHHHHHHHHHHHHHHHHCTSCC.C CS
               HLH   8 rErrRRdriNsafeeLrellPk.a 30 
                       +Er+RR+++ + +++Lr   P+  
  Pp3s32_270V3.1.p 376 NERKRREDVSQNIDKLRVKTPSmK 399
                       7****************9999844 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.3006.9E-584236IPR027417P-loop containing nucleoside triphosphate hydrolase
SuperFamilySSF525401.43E-536236IPR027417P-loop containing nucleoside triphosphate hydrolase
PROSITE profilePS51260205.1837504IPR015862ABC transporter, galactose import, MglA
CDDcd032161.10E-798228No hitNo description
PROSITE profilePS5089321.6898247IPR003439ABC transporter-like
PfamPF000051.2E-2523176IPR003439ABC transporter-like
SMARTSM003824.9E-1232224IPR003593AAA+ ATPase domain
SuperFamilySSF525409.23E-45250482IPR027417P-loop containing nucleoside triphosphate hydrolase
PROSITE profilePS5089319.014258504IPR003439ABC transporter-like
CDDcd032151.63E-89260482No hitNo description
Gene3DG3DSA:3.40.50.3002.6E-48260485IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF000055.8E-21278432IPR003439ABC transporter-like
SMARTSM003820.018286481IPR003593AAA+ ATPase domain
PROSITE patternPS002110405419IPR017871ABC transporter, conserved site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008643Biological Processcarbohydrate transport
GO:0016020Cellular Componentmembrane
GO:0005524Molecular FunctionATP binding
GO:0043211Molecular Functioncarbohydrate-transporting ATPase activity
Sequence ? help Back to Top
Protein Sequence    Length: 506 aa     Download sequence    Send to blast
MAQNAYLLEM KNISKEFPGV KALDDVTLRV RPGTVHALMG ENGAGKSTLM KCLFGIYKPD  60
GGEIVLNGES VTLGSSKDAL LRGISMIHQE LHPVPFRNVM ENIWLGRFPV KKLGPFPFVD  120
EKKMVNDTKK LFEDLGMDLN PHEIVRNLSV SKVQSLEIAK AVSYQSKVIV MDEPTSSLTG  180
NEVEQLFTII HELKSRGVAI IYISHKMEEI LRISDDVTIM RDGKLIGTWL ASELTTDLII  240
SRMVGRDLTQ RYPQKSNTPG DVVLKVEGLT SAFAESFQNV SFELRKGEIL GVGGLVGAQR  300
TELIEALFGL RSISSGKVHL HGKEVKIKSP KEAKKHKMAL LTEERRVTGI IPVLPVLENT  360
VIANLANYQT RYLLLNERKR REDVSQNIDK LRVKTPSMKT LIKNLSGGNQ QKVLLARWLL  420
TEPDILLLDE PTRGVDVGAK YEIYSIIADL ARQGKSIIMI SSEMPELLGM SDRIMVMCDG  480
RLSGVIAGAD ATEEEIMRLA TMHLG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1g6h_A2e-2274947240HIGH-AFFINITY BRANCHED-CHAIN AMINO ACID TRANSPORT ATP-BINDING PROTEIN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1376381ERKRRE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
SwissprotQ896Y20.0MGLA_CLOTE; Galactose/methyl galactoside import ATP-binding protein MglA
TrEMBLA0A3M8D5F60.0A0A3M8D5F6_9BACL; Sugar ABC transporter ATP-binding protein
STRINGBBR47_068100.0(Brevibacillus brevis NBRC 100599)