PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G031200.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 58aa    MW: 7012.12 Da    PI: 10.8186
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G031200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding231.8e-072751126
                        TSSS-HHHHHHHHHHHHHTTTT-HHH CS
     Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWkt 26
                        rg++ +eEdel+++++ +lG++ Wkt
  Prupe.1G031200.1.p 27 RGNFIEEEDELIIKLHSLLGNN-WKT 51
                        78999***************99.886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466895.82E-6850IPR009057Homeodomain-like
PROSITE profilePS5129411.6342257IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.8E-82351IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 58 aa     Download sequence    Send to blast
MLQQYKNHTP IPRKSRLRWI NLPDLKRGNF IEEEDELIIK LHSLLGNNWK TTWKNRQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G031200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A251QSX91e-33A0A251QSX9_PRUPE; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.12e-15myb domain protein 4