PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.1G040800.1.p

Common Name

PRUPE_ppa021272mg

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 207aa MW: 22795.4 Da PI: 6.5753

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.1G040800.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.1	6.9e-05	33	53	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C +C+++F + L +Hi +H Prupe.1G040800.1.p 33 CRICDRVFMSTQALINHIESH 53 ******************999 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50157	8.974	31	58	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	33	53	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence Send to blast
MSGCNWNMRH GGNVHGSNCA PASMPSGSTE IACRICDRVF MSTQALINHI ESHIVDDGLT 60 ASRLRQLTQQ TNTNPPIRGN PAFPLQNPFH QRNPFHDVHN NQIGFAPPPP HHQYPYPQQQ 120 LSPYALPRNV NVNVNQGVVG SHYMVMQSAN QTAARMASEE DDLSSDCTMP LLSQLERPLP 180 PVNYELDHRG NIGEASSDNL DLTLKL*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.1G040800.1.p

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007224424.2	1e-146	uncharacterized protein LOC18789562
TrEMBL	M5XVD2	1e-151	M5XVD2_PRUPE; Uncharacterized protein
STRING	EMJ25623	1e-152	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF14890	8	12

Link Out ? help Back to Top
Phytozome	Prupe.1G040800.1.p
Entrez Gene	18789562