PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G063700.1.p
Common NamePRUPE_ppa023103mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 209aa    MW: 24358.5 Da    PI: 8.5731
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G063700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.81.5e-17101483127
                 NAM   3 pGfrFhPtdeelvveyLkkkvegkk.....leleevikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyW 83 
                         +GfrF+Ptd+e++ ++L k v +k+      + ++vi+++++  +k eP+++ + + +   +++ +yfFs+ +++       +r+t  g+W
  Prupe.1G063700.1.p  10 VGFRFRPTDQEIIGFFLYKMVVEKRpltsmPPYNKVIHKCNLfgNKREPSEIWRDYGGdqlKDQYLYFFSELQRND---LPIQRKTGLGTW 97 
                         7*******************9999888886666678****9833577*****75332222366678****999865...6789999***** PP

                 NAM  84 katgkdkevlsk........kgel..vglkktLvfykgrapkgektdWvmheyr 127
                         ++t + ++v+++        +  l  +g k+ + + +g++++  ++ W+++e +
  Prupe.1G063700.1.p  98 SETVTYQNVKEEvdeingksN--LdvIGRKRKFRYENGSTSE-DHAGWLLDEHS 148
                         *********998777755443..166*********9988888.89*****9976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.66E-188175IPR003441NAC domain
PROSITE profilePS5100520.3718175IPR003441NAC domain
PfamPF023652.7E-1310148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MANSGVTQLV GFRFRPTDQE IIGFFLYKMV VEKRPLTSMP PYNKVIHKCN LFGNKREPSE  60
IWRDYGGDQL KDQYLYFFSE LQRNDLPIQR KTGLGTWSET VTYQNVKEEV DEINGKSNLD  120
VIGRKRKFRY ENGSTSEDHA GWLLDEHSIF KKACKNGTSS NCYDFDVVIC RLRRKGNVDK  180
VREKEEVLFS RSITQEDEKR SIYKGDEN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G063700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021825151.11e-119NAC domain-containing protein 41-like
TrEMBLM5XWG91e-153M5XWG9_PRUPE; Uncharacterized protein
STRINGEMJ260381e-154(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1785336
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01540.11e-09NAC with transmembrane motif1