PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.1G074100.1.p

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 89aa MW: 10402.9 Da PI: 9.9185

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.1G074100.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	47.8	4.9e-15	33	81	1	49
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkkte 49 +fYn+YAk++GFsvr+sk+kk+k++ge++++++vC keg+++e+ +k++ Prupe.1G074100.1.p 33 EFYNDYAKDAGFSVRISKEKKKKKTGEVVWKRYVCFKEGETDETWRKKK 81 6***************************************999877733 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.0E-12	33	80	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 89 aa Download sequence Send to blast
MANALDEFYI PQVKDEKKPK AGLAFQSLDE TYEFYNDYAK DAGFSVRISK EKKKKKTGEV 60 VWKRYVCFKE GETDETWRKK KKTVSLHK*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.1G074100.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021800141.1	1e-38	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A251QTZ8	4e-57	A0A251QTZ8_PRUPE; Uncharacterized protein
STRING	XP_004305530.1	5e-23	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF15907	3	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06250.1	2e-09	FAR1-related sequence 7

Link Out ? help Back to Top
Phytozome	Prupe.1G074100.1.p