PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G207100.2.p
Common NamePRUPE_ppa012528mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 123aa    MW: 13636.6 Da    PI: 8.7228
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G207100.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.92.4e-0556951054
                        HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                        + R +++ +++  L++l+ +      +K + a++L +A++YI+ L
  Prupe.1G207100.2.p 56 KERKEKLGERIVALQQLVSPY-----GKTDTASVLLEAMDYIRFL 95
                        6788899999999*****999.....9****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.103.8E-1045108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088811.634695IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.62E-1251108IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.0E-452101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.26E-656100No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    Send to blast
MIVSSLCNAG ARFSGEEGID VRNMTEHKRS PCSVDQSNFT SLASKRHKTD LSISTKERKE  60
KLGERIVALQ QLVSPYGKTD TASVLLEAMD YIRFLHEQVK VLSAPYLEST PTAKMQVSLS  120
WM*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.45241e-152fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G207100.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007223605.15e-81transcription factor bHLH113 isoform X1
SwissprotQ7XJU21e-37BH153_ARATH; Transcription factor bHLH153
TrEMBLA0A251R0T96e-86A0A251R0T9_PRUPE; Uncharacterized protein
STRINGEMJ248042e-80(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05710.54e-40bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]