PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.1G213700.1.p

Common Name

PRUPE_ppa022966mg

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 124aa MW: 13964.7 Da PI: 6.0947

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.1G213700.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.9	1.1e-10	71	100	1	30
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 1 rrrahnerErrRRdriNsafeeLrellPka 30 ++ +hn+ Er RR+++Ns ++ Lr+llP + Prupe.1G213700.1.p 71 KKLNHNASERDRRKKMNSLYSSLRSLLPVD 100 6789************************85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	10.131	70	119	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.3E-8	70	106	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	5.4E-8	71	100	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	2.47E-9	71	110	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 124 aa Download sequence Send to blast
MLALSPPLFS TIAWPSEDLL SRDQNYFYRD SSIDQSAESF LHILPSHQPH VDLDRSTTIG 60 GDYSGVSTMT KKLNHNASER DRRKKMNSLY SSLRSLLPVD QGVEKADRLE CENLSEKLMS 120 IYA*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.1G213700.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_007202904.1	5e-58	transcription factor ORG2
TrEMBL	M5XN95	2e-85	M5XN95_PRUPE; Uncharacterized protein
STRING	EMJ27582	3e-86	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2402	33	79

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56980.1	2e-16	bHLH family protein

Link Out ? help Back to Top
Phytozome	Prupe.1G213700.1.p
Entrez Gene	18793635