PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G217700.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 200aa    MW: 21909.8 Da    PI: 7.314
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G217700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.94.7e-1053100455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++iN ++  L++l+P +    ++ + Ka  L + ++Y++ Lq
  Prupe.1G217700.1.p  53 SHSLAERARREKINVRMKLLQSLVPGC----DQINGKAHALDEIIKYVQLLQ 100
                         8*************************9....9*****************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.54E-747104No hitNo description
SuperFamilySSF474592.62E-1547115IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.1514999IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-1450110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-753100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-555105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MVSEEEGERK GKKQRKQNGS EAKKQSKVAA AFAERVQRNG VRVKARRGEA TDSHSLAERA  60
RREKINVRMK LLQSLVPGCD QINGKAHALD EIIKYVQLLQ NQVECLAAEL AFVDAMLYDD  120
CELNPSTNPC ASDQRLCCLE PPSSVPFRSL ADAAPTPCTF ASLLLTEDQK ASLIPQVQDG  180
GSFEDVGKHP ARLDHSCTF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G217700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008222403.11e-124PREDICTED: transcription factor bHLH137-like
TrEMBLA0A251R1H11e-144A0A251R1H1_PRUPE; Uncharacterized protein
STRINGXP_008222403.11e-124(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1786056
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.22e-32bHLH family protein