PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G219800.1.p
Common NamePRUPE_ppa004756mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family CO-like
Protein Properties Length: 494aa    MW: 53398.5 Da    PI: 5.6257
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G219800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box21.35.7e-071251437
            zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37
                          C+ + ++++ l+C+ ++  lC  C ++ H+       H
  Prupe.1G219800.1.p 12 VPCDFCTDQPAVLYCKADSAKLCLFCDQHVHSAnllsrkH 51
                        57***************************99555565556 PP
2zf-B_box24.17.6e-085499342
            zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
                         ++C+++ +++++  C +++  lC++C    H +      H+++pl
  Prupe.1G219800.1.p 54 SQICDNCASEPVSVRCSTDNLVLCQECDWDAHGScsvsaaHDRTPL 99
                        689*************************999954888888888775 PP
3CCT64.72.7e-22445488144
                 CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                         R +a+lRYkeK+ktR+++K+irYesRKa+A++R+RvKGrFvk++
  Prupe.1G219800.1.p 445 RGNAMLRYKEKKKTRRYDKHIRYESRKARADTRKRVKGRFVKAT 488
                         7789**************************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003364.1E-13956IPR000315B-box-type zinc finger
PROSITE profilePS501199.328956IPR000315B-box-type zinc finger
CDDcd000216.96E-81256No hitNo description
PfamPF006431.5E-51353IPR000315B-box-type zinc finger
PROSITE profilePS5011910.1115299IPR000315B-box-type zinc finger
PfamPF006434.0E-55498IPR000315B-box-type zinc finger
CDDcd000211.08E-75699No hitNo description
SMARTSM003361.75799IPR000315B-box-type zinc finger
PROSITE profilePS5101714.872445487IPR010402CCT domain
PfamPF062033.1E-16445487IPR010402CCT domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0005515Molecular Functionprotein binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 494 aa     Download sequence    Send to blast
MASPKSRSGE GVPCDFCTDQ PAVLYCKADS AKLCLFCDQH VHSANLLSRK HVRSQICDNC  60
ASEPVSVRCS TDNLVLCQEC DWDAHGSCSV SAAHDRTPLE GFSGCPSALQ LASLLGLDLH  120
DKNVPGQPDP QLQNWDMGMP SLDSSWSGMG LQDLMVPNHN QNGVVYPNDE LMVKRQSAGG  180
ISGKQKQGIQ KQLVELLKRD LDGGGGGGGG GGCGDGGENL VVPRTPTSSA WQEDNGNGNV  240
EGLEPLDLGN RNGGVDGVVV SAATSQPLLQ QQAPFTSLLM MPEENRGIVD GDMLWNSNPH  300
GQSSEIWDFH LGRSRDHEES GPLEVTYGSN DSGFMIKNFG ELMKETSLTD TKMFRDLYQM  360
NCPVGHDDIK FSNNSNNPTP SQGPATSESN NIPVGRPSLG SAFGEDKGSG ASTDLNFMEQ  420
SFLMRGDSLR TVGTKADMEL LAQNRGNAML RYKEKKKTRR YDKHIRYESR KARADTRKRV  480
KGRFVKATEA PDG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G219800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007222337.10.0zinc finger protein CONSTANS-LIKE 15
TrEMBLM5XDL70.0M5XDL7_PRUPE; Uncharacterized protein
STRINGEMJ235360.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47372843
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33500.15e-99B-box type zinc finger protein with CCT domain