PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G224000.2.p
Common NamePRUPE_ppa000516mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family CAMTA
Protein Properties Length: 950aa    MW: 105522 Da    PI: 5.7256
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G224000.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-11024.3e-321288277
                CG-1  2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvgg 77
                        l+e ++rwlk+ e++ iL+n+ek++l++e++++p+sgsl+L+n++++r+fr+DG++w+kkkdg+tv E+he+LK ++
  Prupe.1G224000.2.p 12 LQEaQTRWLKPAEVLYILQNHEKFKLASEPPQQPSSGSLFLFNKRVLRFFRRDGHHWRKKKDGRTVGEAHERLKGKS 88
                        55669*********************************************************************876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143745.2188142IPR005559CG-1 DNA-binding domain
SMARTSM010766.9E-3111132IPR005559CG-1 DNA-binding domain
PfamPF038591.4E-251487IPR005559CG-1 DNA-binding domain
PfamPF018337.5E-8389470IPR002909IPT domain
SuperFamilySSF812964.34E-19389473IPR014756Immunoglobulin E-set
Gene3DG3DSA:2.60.40.109.9E-7389471IPR013783Immunoglobulin-like fold
CDDcd001027.26E-4389473No hitNo description
Gene3DG3DSA:1.25.40.205.9E-17581678IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484031.13E-17583677IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029716.865583675IPR020683Ankyrin repeat-containing domain
CDDcd002042.08E-15588675No hitNo description
PfamPF127966.1E-9591676IPR020683Ankyrin repeat-containing domain
SMARTSM002487.5E-4616645IPR002110Ankyrin repeat
PROSITE profilePS5008811.461616648IPR002110Ankyrin repeat
SMARTSM002481800655684IPR002110Ankyrin repeat
SMARTSM0001513733755IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.199734763IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525402.34E-7777840IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000153.5788810IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.078789818IPR000048IQ motif, EF-hand binding site
PfamPF006120.0084791809IPR000048IQ motif, EF-hand binding site
SMARTSM000151.8E-4811833IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.993812836IPR000048IQ motif, EF-hand binding site
PfamPF006122.9E-5814833IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 950 aa     Download sequence    Send to blast
MMQSGYNIND LLQEAQTRWL KPAEVLYILQ NHEKFKLASE PPQQPSSGSL FLFNKRVLRF  60
FRRDGHHWRK KKDGRTVGEA HERLKGKSST GSFAQSPVSS SSFSHSPSSK TTQNRGSVSM  120
ISDLREPYQN LSSPGSVEVN SDAAIKKNGR ENPDKLYGTG ESDSSAKFDV GQALRRLEEQ  180
LSLNEDSFNE FVDDNPNSDI MDRFNEFLDD TNGSDILEDH SDMTNQDQFT AFHGPEYVVH  240
DQFYGGRVQM QNNTNNSGEH SQFIGQEFAD RNKDSAPWKE VLDSCKPSSV VEPKEKCLYG  300
LDTNEKLPSS FTSGPTEGQE HCQWLNSDGT NVKNFSLSLP EEVDSFKLSP YSSAMGTHSD  360
YYTSLFEQGQ TGTLDSDISL TVAQKQKFTI REISPEWGYA TEATKVIIVG SFLCDPSDSA  420
WSCMFGDIEV PAQIIQDGVL CCEAPPHLFG KVTICITSSN RVSCSEVREF EYRVKGSSGT  480
NNSPPTETTK SAEELLLLVR FVQMLMSDSS MQNRDSVEPE TLRRLKADDD SWDSIIEALL  540
LGSGSASSNI YWLLEELLKD KLQQWLSSRS HGLDQTGCSL SKKEQGIIHM VAGLGFEWAL  600
NSILSCGVNI NFRDINGWTA LHWAARFGRE KMVAVLIASG ASAGAVTDPN SQDPIGKTPA  660
SIAASSGHKG LAGYLSEVSL TSHLSSLTLE ESELSKGSAE VEAEITVNSI SNRSLQGNED  720
QASLKNTLAA VRNAAQAAAR IQSAFRAHSF RKRQHKEAGV SVDDYGISSD DIQGLSAMSK  780
LAFRNPRDYN SAAVSIQKKY RGWKGRKDFL ALRQKVVKIQ AHVRGYQVRK HYKVICWAVG  840
ILDKIVLRWR RKGVGLRGFR HETQSSEESE DEDILKVFRK QKVDGAIDEA VSRVLSMVES  900
PEARQQYHRM LERYHQAKAE LGGTSGEADV PNSLDDTFNI EDIDMYQFP*
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in roots, stems, leaves, flowers and siliques. {ECO:0000269|PubMed:12218065}.
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G224000.2.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020409564.10.0calmodulin-binding transcription activator 4 isoform X1
RefseqXP_020409565.10.0calmodulin-binding transcription activator 4 isoform X1
SwissprotQ9FYG20.0CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBLA0A251R1K00.0A0A251R1K0_PRUPE; Uncharacterized protein
STRINGEMJ266190.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.10.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]