PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G284900.2.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 232aa    MW: 26614 Da    PI: 5.1747
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G284900.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM104.51.3e-32411713128
                 NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k..kvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkd 89 
                         +G+rF+P+++++vv+yL +k+ g++l+++++ike+ +y+++P +Lp    k+  + +e ++F+ +++ y++ gk ++r+tksgyW   g++
  Prupe.1G284900.2.p  41 VGYRFDPSEDQIVVFYLFNKILGRELPINDIIKEISVYEHDPDELPsGdfKHGVDCNEAFYFAYTEQVYSSrGKITRRTTKSGYWDLDGEE 131
                         7*********************************************5444444466799********99963777888************* PP

                 NAM  90 kevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         +ev+ + ++ +v   k++vf+kg+ap+g +td +mheyr+
  Prupe.1G284900.2.p 132 EEVKYRnGDITVMFEKVMVFHKGTAPNGIETDFIMHEYRV 171
                         ***99845667999************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.36E-3239199IPR003441NAC domain
PROSITE profilePS5100533.92839200IPR003441NAC domain
PfamPF023652.9E-1541171IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MPYSSSFIEQ SFSHSSPTQT QTKAQCSKIE NGKKEAEIHL VGYRFDPSED QIVVFYLFNK  60
ILGRELPIND IIKEISVYEH DPDELPSGDF KHGVDCNEAF YFAYTEQVYS SRGKITRRTT  120
KSGYWDLDGE EEEVKYRNGD ITVMFEKVMV FHKGTAPNGI ETDFIMHEYR VNPLIVPTHV  180
LNDSIRAKIE RYVVCRIIQE GVSNFPLTNF HQDGLLGLLK KQNQIDMTEI A*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-223519710165Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G284900.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008221514.11e-168PREDICTED: NAC transcription factor 29-like isoform X2
TrEMBLA0A251R4N81e-172A0A251R4N8_PRUPE; Uncharacterized protein
STRINGXP_008221511.11e-161(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.16e-27NAC-like, activated by AP3/PI