PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G297200.16.p
Common NamePRUPE_ppa003619mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 530aa    MW: 56766.1 Da    PI: 5.5091
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G297200.16.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.5e-08377427355
                          HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           +h+ +Er RR++i +++  L++l+P +   +     Ka +L + ++Y++sLq
  Prupe.1G297200.16.p 377 NSHSLAERVRREKISERMKFLQDLVPGC--SKVVVTGKAVMLDEIINYVQSLQ 427
                          58*************************8..26666*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.41E-10372431No hitNo description
SuperFamilySSF474593.53E-16372445IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.237374426IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-5377427IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.8E-15378443IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-10380432IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 530 aa     Download sequence    Send to blast
MDMGDQDKFE LENRNEDPMN YSPGMAPDWR FGGSNLTNTS VGLVSTGNSM AVSKGDLVGS  60
SSRPSASMVD SFNPTLWDHP TNSQDLGGFC DINGQTSAST SDTIGIRKGI PVSLRSGIDR  120
PLEMCWNPPN SMLKGGIFLP NGPGMLPQSL SQFPADSAFI ERAARFSCFN GGSFSDMLNP  180
FGVPESMSLY SRGGGMMHWT QEVVAGNGSN AVSCAQSQRN EINGGDASRD VTLPIELGTT  240
EGSPLKNEKK SESLVKSHDE AKHTVGGSGN ESDEADFSGG AGQEEPSMLE GTGVEPSSKG  300
SKKRKRSGQA NELDQAHAQQ PGESAQDASE FQQKGEQHPA STTNKTTGKQ SKQGSQASDP  360
PKEEYIHVRA RRGQATNSHS LAERVRREKI SERMKFLQDL VPGCSKVVVT GKAVMLDEII  420
NYVQSLQRQV EFLSMKLATV NPRLDFNIEG LLTKDILQSR VGPSSTLGFS PDMPIAYPQL  480
HPSQSGLIQA DLPGMGSPSD ILRRAMSSQM TPMTGGFKEP SQDQGHQAK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1301306KKRKRS
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G297200.16.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020422357.10.0transcription factor bHLH49 isoform X4
TrEMBLA0A251R7V90.0A0A251R7V9_PRUPE; Uncharacterized protein
STRINGEMJ269270.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.21e-126bHLH family protein