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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Prupe.1G329600.1.p |
| Common Name | PRUPE_ppa005944mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
GRAS |
| Protein Properties |
Length: 437aa MW: 48095.8 Da PI: 6.8321 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.1G329600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 454.4 | 7.3e-139 | 68 | 427 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91
lv+ L++cA+av++++l+la+al++++ la +++ +m+++a+yf+eALa+r++r +y p++ ++s + + + f+e++P+l
Prupe.1G329600.1.p 68 LVHGLMACAKAVQQNNLNLAKALVTQIGYLAISQAGAMRKVATYFAEALAQRIFR----VY----PQSPI--DHSFSDMLQMHFYETCPYL 148
6899***************************************************....44....33333..23444444556******** PP
GRAS 92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182
kf+h+taNqaIlea++g++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+s++++ l+e+g++La++Ae+++v+fe++ +v
Prupe.1G329600.1.p 149 KFAHFTANQAILEALQGKTRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPASDNSDHLQEVGWKLAQLAETIHVEFEYRGFV 239
******************************************************************************************* PP
GRAS 183 akrledleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
a++l+dl+ ++L+++p E++aVn+v++lh+ll++++++e+ vL++vk+++P++v+vveqea+hn++ F++rf e+l+yys+lfdsl
Prupe.1G329600.1.p 240 ANSLADLDASMLELRPseVESVAVNSVFELHKLLARPGAIEK----VLSVVKQMKPEIVTVVEQEANHNGPVFMDRFNESLHYYSTLFDSL 326
****************88899*********************....********************************************* PP
GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlg 361
e ++ +++++ +++ +lg++i+nvvaceg +r+erhetl +Wr rl++ GF pv+l+++a kqa++ll+ ++ +dgyrvee++g+l+lg
Prupe.1G329600.1.p 327 EGSV---NSQDKAMSELYLGKQICNVVACEGVDRVERHETLTQWRTRLDSGGFVPVHLGSNAFKQASMLLALFAgGDGYRVEENNGCLMLG 414
***7...88889999999************************************************************************* PP
GRAS 362 WkdrpLvsvSaWr 374
W++rpL+++SaW+
Prupe.1G329600.1.p 415 WHTRPLIATSAWK 427
************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 437 aa
Download sequence Send
to blast |
MFPQTHHDSS SREAKRLKPS SGSSASDLVF NRRTASSLPQ PQPLSIPTTE SSTRPALLVD 60
SQENGVRLVH GLMACAKAVQ QNNLNLAKAL VTQIGYLAIS QAGAMRKVAT YFAEALAQRI 120
FRVYPQSPID HSFSDMLQMH FYETCPYLKF AHFTANQAIL EALQGKTRVH VIDFSMNQGM 180
QWPALMQALA LRPGGPPAFR LTGIGPPASD NSDHLQEVGW KLAQLAETIH VEFEYRGFVA 240
NSLADLDASM LELRPSEVES VAVNSVFELH KLLARPGAIE KVLSVVKQMK PEIVTVVEQE 300
ANHNGPVFMD RFNESLHYYS TLFDSLEGSV NSQDKAMSEL YLGKQICNVV ACEGVDRVER 360
HETLTQWRTR LDSGGFVPVH LGSNAFKQAS MLLALFAGGD GYRVEENNGC LMLGWHTRPL 420
IATSAWKPGC DSVMAH*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcriptional regulator that acts as a repressor of the gibberellin (GA) signaling pathway. Probably acts by participating in large multiprotein complexes that represses transcription of GA-inducible genes. Upon GA application, it is degraded by the proteasome, allowing the GA signaling pathway (By similarity). {ECO:0000250}. |
