PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G373700.1.p
Common NamePRUPE_ppa005361mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family TALE
Protein Properties Length: 466aa    MW: 51836.1 Da    PI: 6.1341
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G373700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.72.3e-093884251954
                         HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
            Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                         Fe   ++yp+ +e+  LA+++gL+++qV++WF N R +
  Prupe.1G373700.1.p 388 FEHflHPYPNDSEKLLLASQTGLSKNQVSNWFINARVR 425
                         564459******************************88 PP
2BELL99.23.2e-32251321272
                BELL   2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                         ++elq++ a L++lle+V++r ++y++q++ v+ssFe+v+g g+ak+Yt+lAlka+SrhF +L+dai+++i
  Prupe.1G373700.1.p 251 KHELQARLANLITLLEQVEDRCEKYYHQMEEVMSSFEMVVGEGAAKSYTALALKAMSRHFCSLRDAIVSHI 321
                         79******************************************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005746.5E-35181319IPR006563POX domain
PfamPF075261.1E-40186318IPR006563POX domain
PROSITE profilePS5007111.807366429IPR001356Homeobox domain
SMARTSM003894.1E-8369433IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.5E-26374435IPR009057Homeodomain-like
CDDcd000864.16E-11375430No hitNo description
SuperFamilySSF466894.71E-17375436IPR009057Homeodomain-like
PfamPF059201.8E-16386425IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    Send to blast
MVSQDSPPNP ASSIFHQFII SDSIAAQNHL ESQHLDAYES SFRNRNTFPQ SLGVLPSLHS  60
LGERMSRSVA LVQAPTGAED SDMNNQTRHL MDLPRAATEN QAQRLSLSLG SHMLVPSVQY  120
RQRSMNSDLM SHNHFIIGEE SGEACNPGVE HVSDEYCFIG SALASSSNSL SRSCSTSYGT  180
ESLADVIGNS RYLKPAQSLL DEIVNVGGKQ VDISNEKHVG KLYGEGRRGA MGFSSELKAE  240
LCCNGLMSAD KHELQARLAN LITLLEQVED RCEKYYHQME EVMSSFEMVV GEGAAKSYTA  300
LALKAMSRHF CSLRDAIVSH IYAEKRKLLQ DVPKISSGLS QLNLFDRECR HKRMSLQQLG  360
IFQSQRQAFR PIRGLPETSV AILRTWLFEH FLHPYPNDSE KLLLASQTGL SKNQVSNWFI  420
NARVRLWKPM IEEMYKEEFG ESSEDSNSFA GGSMTGEGNT DHTED*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A4e-16375432158Homeobox protein Meis1
4xrs_B4e-16375432158Homeobox protein Meis1
5bng_A5e-16375433159Homeobox protein Meis2
5bng_B5e-16375433159Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G373700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007223034.10.0BEL1-like homeodomain protein 11
RefseqXP_020424621.10.0BEL1-like homeodomain protein 11
SwissprotQ1PFD11e-104BLH11_ARATH; BEL1-like homeodomain protein 11
TrEMBLM5XRQ50.0M5XRQ5_PRUPE; Uncharacterized protein
STRINGEMJ242330.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126452329
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75430.11e-107BEL1-like homeodomain 11