PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G393000.1.p
Common NamePRUPE_ppa008566mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 328aa    MW: 36576.1 Da    PI: 7.8542
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G393000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.21.6e-28172231159
                         ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         ++Dgy+WrKYGqK+ ++++ pr+YY+C++a +Cpvkkkv++sae+p +++ tYegeHnh 
  Prupe.1G393000.1.p 172 VKDGYQWRKYGQKVTRDNPSPRAYYKCSFApSCPVKKKVQKSAENPCLLVATYEGEHNHM 231
                         58***************************99****************************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.8E-28162233IPR003657WRKY domain
PROSITE profilePS5081125.935167233IPR003657WRKY domain
SuperFamilySSF1182902.88E-24169233IPR003657WRKY domain
SMARTSM007741.8E-31172232IPR003657WRKY domain
PfamPF031063.3E-23173230IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0002237Biological Processresponse to molecule of bacterial origin
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009751Biological Processresponse to salicylic acid
GO:0010200Biological Processresponse to chitin
GO:0042742Biological Processdefense response to bacterium
GO:0050691Biological Processregulation of defense response to virus by host
GO:0050832Biological Processdefense response to fungus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042802Molecular Functionidentical protein binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MDSEWVNTSL GLNVIPFHPA SDDQAPVKKQ QELEGDYAKV FEGHASVKQE AAASHVLTEE  60
LNRISLENKK LTEMLTALCE NYTNLQSHVK ELMTAKQQSS DQNDLATNFN KKRKPDSEDY  120
RNMIGLTSPG TNTETSSISD EEYPCKRPKE NMNLKISKVY VRTEASDTRL IVKDGYQWRK  180
YGQKVTRDNP SPRAYYKCSF APSCPVKKKV QKSAENPCLL VATYEGEHNH MHPETRAEVT  240
LIGSISPNQQ LSPLSPSMAK RTSPVPTFSC DKNNNLSPRE IEGAPPAFQQ FLVQQMASSL  300
TKDPNFASAL AAAISGRFSD HSRMGNW*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-191712331374WRKY transcription factor 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00465DAPTransfer from AT4G31800Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G393000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020411397.10.0WRKY transcription factor 18
TrEMBLA0A251RCV90.0A0A251RCV9_PRUPE; Uncharacterized protein
STRINGEMJ238500.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97334115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.15e-75WRKY DNA-binding protein 18