PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G419000.2.p
Common NamePRUPE_ppa019623mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family GRF
Protein Properties Length: 458aa    MW: 49567.3 Da    PI: 9.4195
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G419000.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC78.27.8e-2576120145
                 WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
                         d+epgrCrRtDGKkWRC+r++++++k+CErH++rgr+rsrk++e+
  Prupe.1G419000.2.p  76 DPEPGRCRRTDGKKWRCWRDAVPDQKYCERHMNRGRHRSRKPVEP 120
                         79****************************************985 PP
2QLQ637.8e-221046137
                 QLQ  1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37
                        ++FT++Q+++L++Q+l+yKy+ an+P+P++Ll +i+k
  Prupe.1G419000.2.p 10 GPFTPSQWMELEHQALIYKYITANVPIPSNLLIPIKK 46
                        59*********************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009516.4E-131046IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088806.9E-161144IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166623.911146IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166726.02376120IPR014977WRC domain
PfamPF088792.0E-2077119IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MHWDIAGVRG PFTPSQWMEL EHQALIYKYI TANVPIPSNL LIPIKKALDS AFPNGLPRPN  60
TLGWGSIHLG FSNNTDPEPG RCRRTDGKKW RCWRDAVPDQ KYCERHMNRG RHRSRKPVEP  120
VAGTTAAATT TTTTSKQLMS SASSSASSVS IPAGGGSSSL SIANQQLKSL QPAASNSSAA  180
TQMNRMFMNK ENVGERMHQT PGPSMLSKEN PFFIQKQQMG YEESSRTEFG LVPSDSLLNP  240
SQKGSSLMSC RNYGSSSQNL TDPAETNSQQ HSLRHFIDDW PKNQSNRPAI SWPDQFDMQS  300
DRTQLSISIP IASSDFIPST SSTNNEKLTL SPLRLSRELN PKPMGLGVGS ALNAQNNKQA  360
NWIPISWETS LGGPLGEVLH HTNNNTAAEC KNSSVLNLMT EGWDKNSPSS LGSSPTGVLQ  420
KTAFGSLSNS SAGSSPRAEN NNLLGSSILD SSSLPAL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G419000.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAM4733682e-45AM473368.1 Vitis vinifera, whole genome shotgun sequence, contig VV78X262323.6, clone ENTAV 115.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007227185.10.0growth-regulating factor 6
TrEMBLM5XR270.0M5XR27_PRUPE; Uncharacterized protein
STRINGEMJ283840.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37740.11e-82growth-regulating factor 2