PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.1G424000.1.p

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

bHLH

Protein Properties

Length: 100aa MW: 11082.7 Da PI: 6.5112

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.1G424000.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.7	5.6e-05	43	64	34	55
TTS-STCHHHHHHHHHHHHHHH CS HLH 34 pskKlsKaeiLekAveYIksLq 55 +++K++ +++Le+Av+Y+k Lq Prupe.1G424000.1.p 43 NGTKVDLSTMLEEAVDYVKFLQ 64 5699*****************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:4.10.280.10	1.8E-6	38	72	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	5.89E-7	38	79	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	3.77E-5	38	68	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 100 aa Download sequence Send to blast
MEGELQTTKH HHQPALNFHG KARTSRAAAT DPESLYARNL VPNGTKVDLS TMLEEAVDYV 60 KFLQLQIKLL SSDDTWMYAP IAYIGMDIGL NLQKISPLL*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.1G424000.1.p

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011459816.1	2e-39	PREDICTED: transcription factor bHLH85-like
Swissprot	Q7XHI9	9e-38	BH084_ARATH; Transcription factor bHLH84
TrEMBL	A0A251RBD8	8e-68	A0A251RBD8_PRUPE; Uncharacterized protein
STRING	EMJ27521	2e-51	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF807	33	121

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G14760.1	4e-40	bHLH family protein

Link Out ? help Back to Top
Phytozome	Prupe.1G424000.1.p