PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G424300.1.p
Common NamePRUPE_ppa009924mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 273aa    MW: 28608.7 Da    PI: 8.8785
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G424300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2130.00032107129123
                         EEETTTTEEESSHHHHHHHHHHT CS
             zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                         ykC+ C+k F++   L  H  +H
  Prupe.1G424300.1.p 107 YKCSVCNKAFPSYQALGGHKASH 129
                         9***********99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576674.25E-9107129No hitNo description
SMARTSM003550.0057107129IPR015880Zinc finger, C2H2-like
PfamPF139126.4E-14107131IPR007087Zinc finger, C2H2
PROSITE profilePS501579.951107129IPR007087Zinc finger, C2H2
PROSITE patternPS000280109129IPR007087Zinc finger, C2H2
SuperFamilySSF576674.25E-9157184No hitNo description
PfamPF139122.3E-13161186IPR007087Zinc finger, C2H2
SMARTSM003550.19162184IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.411162184IPR007087Zinc finger, C2H2
PROSITE patternPS000280164184IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006979Biological Processresponse to oxidative stress
GO:0009409Biological Processresponse to cold
GO:0009414Biological Processresponse to water deprivation
GO:0009611Biological Processresponse to wounding
GO:0009644Biological Processresponse to high light intensity
GO:0009651Biological Processresponse to salt stress
GO:0009737Biological Processresponse to abscisic acid
GO:0010117Biological Processphotoprotection
GO:0010200Biological Processresponse to chitin
GO:0015979Biological Processphotosynthesis
GO:0035264Biological Processmulticellular organism growth
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MALQALNSPT TAGASPFRFE EAASKINYVE PWTKRKRSKR PRLDSPSTEE EYLALCLIML  60
ARGGSGSTSA ATTATNSAAS HHMITQSPSN ASHQEPSTSA QPPKLSYKCS VCNKAFPSYQ  120
ALGGHKASHR KGAAGSAAEG PSTSSNTTTS GTTTVTASGR THECSICHKS FPTGQALGGH  180
KRCHYEGGVG ASTATATATT TSAVTSSEGV GSTSHQAVSH GHRETFDLNM PALPEFSRDF  240
FLCGEDEVES PHPAKKPRIL TIMKPKQEIS QN*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.62140.0fruit| leaf
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00162DAPTransfer from AT1G27730Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G424300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007222874.10.0zinc finger protein ZAT10
TrEMBLM5XRA30.0M5XRA3_PRUPE; Uncharacterized protein
STRINGEMJ240730.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13273291
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.12e-48salt tolerance zinc finger