PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G431900.1.p
Common NamePRUPE_ppa006432mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 413aa    MW: 47244.3 Da    PI: 7.3268
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G431900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.20.00027154177123
                         EEETTTTEEESSHHHHHHHHHH.T CS
             zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                         y C+ Cg+ ++++ +Lk+H +  H
  Prupe.1G431900.1.p 154 YICGVCGRKCKSNLDLKKHFKQlH 177
                         89*****************98766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.10108.0E-874144IPR029060PIN domain-like
PROSITE profilePS5015710.616154182IPR007087Zinc finger, C2H2
PROSITE patternPS000280156177IPR007087Zinc finger, C2H2
CDDcd061673.08E-12165308No hitNo description
Gene3DG3DSA:3.40.50.10108.0E-8239307IPR029060PIN domain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MNLLCNPIHT FPYKPFPLFS LHSSRSPFFN SKRSFQPQPI ITLSTRTRSY VAIKAAANSE  60
IDMVQNKQGI YTPKQKKVVI LWDLDNKPPR GPPYQAAMAL KQVAQRFGEV VESSAYANRH  120
AFDHLPQWVI EQRRERKQLD ILERKGVVVP SEPYICGVCG RKCKSNLDLK KHFKQLHERE  180
RQKKLNRMRS LKGKKRQRFK ERFVSGNHKY NEAARSLIKP KVGYGLASEL RRAGVFVKTV  240
EDKPQAADWA LKRQMQHSMS RGIDWLFLVS DDSDFSEMLR KAREANLGTV VVGDFDRALG  300
RHADVWVPWI GVENGEVSEK DLVPKRRRSE FFDEDDDDKG DGLFSHSVFD GGSELDNVVD  360
ELVVSRPLSS GMRISAFSEG ELEEGDWVED DGDSEDSEDY LLDSEDEEDG FF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G431900.1.p
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007222703.10.0uncharacterized protein LOC18791925
TrEMBLM5XCQ90.0M5XCQ9_PRUPE; Uncharacterized protein
STRINGEMJ239020.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF64413135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52010.11e-174C2H2-like zinc finger protein