PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G432000.1.p
Common NamePRUPE_ppa012302mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 176aa    MW: 19844.9 Da    PI: 9.8061
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G432000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.51.4e-174897255
                 AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                        +y+G+r +k +g+WvAeIr+p   +kr r++lg++ t+  Aa+a++ a  +l+g
  Prupe.1G432000.1.p 48 QYRGIRMRK-WGKWVAEIREP---NKRSRIWLGSYTTPVAAARAYDTAVFYLRG 97
                        7******99.**********9...336*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.8E-3047106IPR001471AP2/ERF domain
CDDcd000184.70E-2847107No hitNo description
PfamPF008471.4E-104897IPR001471AP2/ERF domain
PROSITE profilePS5103222.31348105IPR001471AP2/ERF domain
SuperFamilySSF541714.71E-2148106IPR016177DNA-binding domain
SMARTSM003802.4E-3748111IPR001471AP2/ERF domain
PRINTSPR003678.2E-124960IPR001471AP2/ERF domain
PRINTSPR003678.2E-1287107IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009414Biological Processresponse to water deprivation
GO:0042538Biological Processhyperosmotic salinity response
GO:0005634Cellular Componentnucleus
GO:0001078Molecular Functiontranscriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MEGEYCCSSS SSSSTTTTTS IEKRKQRQNQ QQQQQVGGNH DHRHQEKQYR GIRMRKWGKW  60
VAEIREPNKR SRIWLGSYTT PVAAARAYDT AVFYLRGPSA RLNFPELVFQ EDGQQLHDMS  120
AASIRKKATE VGAKVDAVET AHRSPISQSK TTSSLVNSQK PDLNKYPDPE NSDEN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A6e-1647108466ATERF1
3gcc_A6e-1647108466ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G432000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007223577.11e-130ethylene-responsive transcription factor ERF011
RefseqXP_007223578.11e-130ethylene-responsive transcription factor ERF011
RefseqXP_021820292.11e-130ethylene-responsive transcription factor ERF011-like
SwissprotQ9SNE13e-51ERF11_ARATH; Ethylene-responsive transcription factor ERF011
TrEMBLA0A314ZEE71e-129A0A314ZEE7_PRUYE; Ethylene-responsive transcription factor ERF011
TrEMBLM5XH141e-129M5XH14_PRUPE; Uncharacterized protein
STRINGEMJ247761e-130(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF129032106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50260.12e-52cooperatively regulated by ethylene and jasmonate 1
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Shen PC,Hour AL,Liu LD
    Microarray meta-analysis to explore abiotic stress-specific gene expression patterns in Arabidopsis.
    Bot Stud, 2017. 58(1): p. 22
    [PMID:28510204]