PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.1G432600.1.p

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 288aa MW: 33174.8 Da PI: 9.7249

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.1G432600.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	83.8	3.6e-26	12	141	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklel..eevikevdiykvePwdLp.k...kvkaeekewyfFskrdkkyatgkrknratksgyWka 85 lppG+rF P++e+l+ +yL +k +++ + + i+e+d+y+++P dLp + ++ + ++ ++F+ + + k+r +ksgyW+ Prupe.1G432600.1.p 12 LPPGCRFYPSEEQLLRCYLSNKNDADLAQSggYDLIRELDLYDHDPFDLPdSacySYGHAGRKRHWFCYTVRVL-----KERRAKSGYWRR 97 79******************9887744422567**********9535552222334555555555543.....3455699* PP NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapk.gektdWvmheyr 127 +g+d++v+ + ++++ g ++++vfy g++p+ +++tdWv+ +y+ Prupe.1G432600.1.p 98 KGRDRDVVGRgGKAVLGRRTSFVFYLGNSPNtAVRTDWVLYQYA 141 *****9556678*****997665167*******6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.7E-31	8	158	IPR003441	NAC domain
PROSITE profile	PS51005	35.116	12	158	IPR003441	NAC domain
Pfam	PF02365	8.4E-15	13	141	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence Send to blast
MGDPKATSLR SLPPGCRFYP SEEQLLRCYL SNKNDADLAQ SGGYDLIREL DLYDHDPFDL 60 PDSACYSYGH AGRKRHWFCY TVRVLKERRA KSGYWRRKGR DRDVVGRGGK AVLGRRTSFV 120 FYLGNSPNTA VRTDWVLYQY AQVDHVKASF VLCRVFVRSR HGNRLSYNGV SSCAEESACT 180 VRHIGIQHDG FHTPNIVETE VHGDNSAHRK NEMLNFPMRL DREINDRVKN GPVSISRLQP 240 NGQVCRQKYP HDSKQMKSIN LWSRHPCLVV VIQYFLMIWK LSIYFPL*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	2e-20	11	164	16	171	NO APICAL MERISTEM PROTEIN
1ut4_B	2e-20	11	164	16	171	NO APICAL MERISTEM PROTEIN
1ut7_A	2e-20	11	164	16	171	NO APICAL MERISTEM PROTEIN
1ut7_B	2e-20	11	164	16	171	NO APICAL MERISTEM PROTEIN
3swm_A	1e-20	11	164	19	174	NAC domain-containing protein 19
3swm_B	1e-20	11	164	19	174	NAC domain-containing protein 19
3swm_C	1e-20	11	164	19	174	NAC domain-containing protein 19
3swm_D	1e-20	11	164	19	174	NAC domain-containing protein 19
3swp_A	1e-20	11	164	19	174	NAC domain-containing protein 19
3swp_B	1e-20	11	164	19	174	NAC domain-containing protein 19
3swp_C	1e-20	11	164	19	174	NAC domain-containing protein 19
3swp_D	1e-20	11	164	19	174	NAC domain-containing protein 19
4dul_A	2e-20	11	164	16	171	NAC domain-containing protein 19
4dul_B	2e-20	11	164	16	171	NAC domain-containing protein 19
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.1G432600.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020410880.1	0.0	NAC domain-containing protein 72 isoform X2
TrEMBL	A0A251RC60	0.0	A0A251RC60_PRUPE; Uncharacterized protein
STRING	EMJ25697	0.0	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF13001	26	28

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	8e-21	NAC family protein

Link Out ? help Back to Top
Phytozome	Prupe.1G432600.1.p