PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.1G574400.1.p
Common NamePRUPE_ppb014811mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 119aa    MW: 13757.8 Da    PI: 8.3368
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.1G574400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.62.9e-10694287
                        EEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                  B3  2 fkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgr 87
                        +k lt  dv+++  + lp + ++      +g+   ++ l+++d  g  We+ +++    ++++ ++ ++GW +Fv+ +gLk+gD +v+  + +
  Prupe.1G574400.1.p  6 EKCLTETDVGSR--FALPISWLSVLppieQGS--HEFHLQVTDGFGFFWEFCCSIrrvGRYRKPVFQSEGWLKFVNHKGLKVGDKIVLDSEAN 94
                        688888888886..699999996668775444..446799999999*******885444444448888*******************995433 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd100171.45E-10489No hitNo description
SuperFamilySSF1019367.65E-11594IPR015300DNA-binding pseudobarrel domain
SMARTSM010190.00955107IPR003340B3 DNA binding domain
PfamPF023624.7E-8694IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.9E-116106IPR015300DNA-binding pseudobarrel domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 119 aa     Download sequence    Send to blast
MAARYEKCLT ETDVGSRFAL PISWLSVLPP IEQGSHEFHL QVTDGFGFFW EFCCSIRRVG  60
RYRKPVFQSE GWLKFVNHKG LKVGDKIVLD SEANDFRGTQ FRIRAQKLNK ECDQWLDV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.1G574400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021824681.15e-34uncharacterized protein LOC110765763
TrEMBLM5XUX63e-83M5XUX6_PRUPE; Uncharacterized protein
STRINGEMJ229156e-84(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2060778