PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G063800.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 203aa    MW: 22169 Da    PI: 7.7666
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G063800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof97.41e-3062123263
              zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
                         ++k l+cprC+s +tkf  +nnys+ qPr+fCk+CrryWt+GG++rn+P+G+ r +nk+sss
  Prupe.2G063800.1.p  62 PDKVLPCPRCNSLKTKFYCFNNYSVYQPRHFCKSCRRYWTAGGTIRNLPLGTRRHRNKHSSS 123
                         78999****************************************************99875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074788.0E-2149119IPR003851Zinc finger, Dof-type
PfamPF027017.2E-2663120IPR003851Zinc finger, Dof-type
PROSITE profilePS5088424.27966120IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MHGGPSVKVS CKQDQFFELD KVSENNHHGQ ILENEGEVDC NPEEDCIASD TDDGKEKAFT  60
KPDKVLPCPR CNSLKTKFYC FNNYSVYQPR HFCKSCRRYW TAGGTIRNLP LGTRRHRNKH  120
SSSQYHQVVG EPSAVPVTQG DTLNFVGQQH LSPVQLPAFP KPVNGMREVF IVAFGEVGGV  180
GVVGVVGVVG VVGGVGAFRD YG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G063800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020412797.11e-125cyclic dof factor 2
TrEMBLA0A251QC881e-147A0A251QC88_PRUPE; Uncharacterized protein
STRINGEMJ203291e-124(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF35023165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62430.12e-30cycling DOF factor 1