PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G114800.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 102aa    MW: 11416.4 Da    PI: 3.8392
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G114800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.84.4e-07755347
                        SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHHHHH CS
     Myb_DNA-binding  3 rWTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrwqky 47
                         WT eE + +  a++ +  +      W++++  ++ g++  q+k+++  +
  Prupe.2G114800.1.p  7 EWTREENKAFEIAIATYNIEciekgEWEKVSLSVP-GKSIDQIKLHFMHL 55
                        7****************999***************.**********9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466896.06E-8660IPR009057Homeodomain-like
CDDcd001675.59E-5756No hitNo description
Gene3DG3DSA:1.10.10.601.9E-4756IPR009057Homeodomain-like
PROSITE profilePS500906.226856IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    Send to blast
MAGAIDEWTR EENKAFEIAI ATYNIECIEK GEWEKVSLSV PGKSIDQIKL HFMHLLMDVE  60
AIESDQGPLP DYEYDEDEND GDDGNDGDHG DNKEKEMSIV P*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G114800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A251QEF42e-67A0A251QEF4_PRUPE; Uncharacterized protein
STRINGXP_004308717.13e-23(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1753345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.14e-14MYB family protein