PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G138400.3.p
Common NamePRUPE_ppa001781mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 653aa    MW: 71631.2 Da    PI: 5.4063
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G138400.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS252.21.9e-7737365187374
                GRAS  87 vsPi.lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpf 176
                         +sP+ l+f+++t+NqaIleaveg +rvH+iDfdi++G+QW++++q+ a R+ g+ps++iT++ s++++++ e+  t+e+L++fA+el+++f
  Prupe.2G138400.3.p 373 LSPVvLQFANFTCNQAILEAVEGFNRVHVIDFDIGYGGQWASFMQEVALRNCGAPSFKITAFISSSTHDEFEIGFTRENLKHFASELNLSF 463
                         5674279*********************************************************9*9************************ PP

                GRAS 177 efnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysal 267
                         e +++  ++l+    + L ++  E +aV + l + ++ ++++sl+      L++vk+lsPk+vv  ++ +d+++ +F+++++++l+ ys l
  Prupe.2G138400.3.p 464 ELELVSLEALN-SGSWGLPLHVSEGVAVAVNLPIGSFSNNPLSLTM----ALRFVKQLSPKIVVSLDRGSDRTDVPFAHQIIQSLHSYSGL 549
                         ***97444444.4467776666777777777777888889999999....***************************************** PP

                GRAS 268 fdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgsl 358
                         ++sl+a    + ++ +k+Er ll++ i+++v+ ++ +     ++   Wr  ++++GF+p+++s+++++qa++l++++++ g+++e+++ sl
  Prupe.2G138400.3.p 550 LESLDAV-NVNPDALQKIERYLLQPGIEKIVTGRHLS----PKRTPPWRTLFSSSGFSPLTFSNFTESQAECLVQRTPVGGFHIEKRQSSL 635
                         ****665.34668999****************99998....9999********************************************** PP

                GRAS 359 vlgWkdrpLvsvSaWr 374
                         vl+W+++ L+svS+Wr
  Prupe.2G138400.3.p 636 VLCWQHKDLISVSVWR 651
                         ***************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098531.668259631IPR005202Transcription factor GRAS
PfamPF035146.7E-75373651IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 653 aa     Download sequence    Send to blast
MKAMPLPFEQ FQGKGVLDFS SSTSDSQPPQ NQHLHHHHNQ QQQQQKWNQN SNKENCYVGS  60
TEPTSVLDAR RSPSPPTSSS TLSSSLGGGG GASGGGGGGS GSTDTTTCLG TTAAAVYENI  120
SQTPIEESKC GPALGMEDWE SVLPESPGQE QSILRLIMSD IEDPSLGLNK LLQSGSGSDQ  180
QDLEFSAGFH DVVDQGGYDG FEPNTGNLQQ QQHMGMDEKP QIFNPQMVMN QNQAQFTQNP  240
AMFMPLTYAQ LQEHHLLSPP PPKRFNSGGF GPNYPVQRAP FSNPGQELLV RAQQQQQQLQ  300
FLPQHLQQQR PTMLVKENML SPAEGTKEMM NQNQNQQQLQ QAAIDQLFNA AELIETGNPA  360
LAQGILARLN HQLSPVVLQF ANFTCNQAIL EAVEGFNRVH VIDFDIGYGG QWASFMQEVA  420
LRNCGAPSFK ITAFISSSTH DEFEIGFTRE NLKHFASELN LSFELELVSL EALNSGSWGL  480
PLHVSEGVAV AVNLPIGSFS NNPLSLTMAL RFVKQLSPKI VVSLDRGSDR TDVPFAHQII  540
QSLHSYSGLL ESLDAVNVNP DALQKIERYL LQPGIEKIVT GRHLSPKRTP PWRTLFSSSG  600
FSPLTFSNFT ESQAECLVQR TPVGGFHIEK RQSSLVLCWQ HKDLISVSVW RC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5hyz_A1e-2237965191375GRAS family transcription factor containing protein, expressed
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G138400.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016650249.10.0PREDICTED: LOW QUALITY PROTEIN: scarecrow-like protein 22
TrEMBLA0A251QFK10.0A0A251QFK1_PRUPE; Uncharacterized protein
STRINGXP_008232583.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-113GRAS family protein