PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G154100.1.p
Common NamePRUPE_ppa020007mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ARR-B
Protein Properties Length: 570aa    MW: 64274.9 Da    PI: 6.4758
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G154100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like74.71.2e-23207260155
             G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                         kp+l+Wt+eLH+rF+ av+ L G + A Pk+il++m+v+gL  e+v SHLQkYRl
  Prupe.2G154100.1.p 207 KPKLVWTNELHKRFLLAVRLL-GVDSAHPKKILQHMNVPGLRKENVSSHLQKYRL 260
                         79*******************.********************************8 PP
2Response_reg52.72.4e-18241321108
                         EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHH CS
        Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalea 89 
                         vl+vd + + + +l ++l + gy+ v +a+ + +al ++++k+   +l+l+   +p+md +ell+++++ + k+p++++++ ++e+ +l  
  Prupe.2G154100.1.p  24 VLVVDGDSACLAILSRMLYNLGYKAVMTAKRAYDALSIAQKKEdeLHLVLTEAHLPDMDKYELLEKMKAVS-KVPVVIMSDDDDENAMLGG 113
                         89*************************************888889***********************999.******************* PP

                         HHTTESEEEESS--HHHHH CS
        Response_reg  90 lkaGakdflsKpfdpeelv 108
                         l  Ga  +++Kp  ++ l 
  Prupe.2G154100.1.p 114 LFKGAVFYFVKPLTINSLK 132
                         *************999886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23001.2E-2316136No hitNo description
SMARTSM004489.5E-1522135IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF521729.11E-2322139IPR011006CheY-like superfamily
PROSITE profilePS5011030.23823139IPR001789Signal transduction response regulator, receiver domain
PfamPF000728.1E-1424133IPR001789Signal transduction response regulator, receiver domain
CDDcd001563.48E-1525139No hitNo description
Gene3DG3DSA:1.10.10.609.1E-26204264IPR009057Homeodomain-like
PROSITE profilePS512949.33204263IPR017930Myb domain
SuperFamilySSF466892.51E-17205264IPR009057Homeodomain-like
TIGRFAMsTIGR015573.0E-21207260IPR006447Myb domain, plants
PfamPF002496.7E-7210259IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 570 aa     Download sequence    Send to blast
MSDEKAISIE SVNSSSPRLE AVSVLVVDGD SACLAILSRM LYNLGYKAVM TAKRAYDALS  60
IAQKKEDELH LVLTEAHLPD MDKYELLEKM KAVSKVPVVI MSDDDDENAM LGGLFKGAVF  120
YFVKPLTINS LKNLWQFAII KNRNHVVIDF TEEESSVYAE SQQENTSNEG LERDSFMTRD  180
RWLERKNPEG TYKDEERENS DSTSQKKPKL VWTNELHKRF LLAVRLLGVD SAHPKKILQH  240
MNVPGLRKEN VSSHLQKYRL SLKREQEAIM KARARGPKKS NFPSHQSLST LNFRGGCSHT  300
LNRYSTSTAY QPKRRSHVQD LSSHMSRPSP AGSVCFPSQV YSSGHPTLGN ESSFTSMPYH  360
SNYKNGQPTL NNQLDYTNDH NTNHIGNRIT SNKELAGFRQ VGSFVRYSNF DGNKTFSTFG  420
DHGHSNLVDF PIFLHNSTQQ EEQQQKQLQP QVLFSPPLQM PSPPPQPKEQ QQNDILGQER  480
QLQPQFLPSA PLQMPSPSPL PAAAEQQGEQ DDIFGLESQL MQSPQWHMPS MPAAPTAHEQ  540
EKDDPFGIES EETDDLFDIA KGTTQHFND*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A8e-18203264162ARR10-B
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1312316KRRSH
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G154100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007221154.10.0two-component response regulator ARR1
TrEMBLA0A251QHH00.0A0A251QHH0_PRUPE; Uncharacterized protein
STRINGEMJ223530.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF145541114
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.12e-55response regulator 2