PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G158400.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 92aa    MW: 10100.6 Da    PI: 7.5205
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G158400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.81.8e-115180130
                        TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
     Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIart 30
                        +g WT+eEde+l++av+++ g++Wk+I  +
  Prupe.2G158400.1.p 51 KGGWTEEEDEILAHAVQKFNGRNWKKIGVY 80
                        688************************866 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.2E-84877IPR009057Homeodomain-like
SuperFamilySSF466892.23E-74880IPR009057Homeodomain-like
PROSITE profilePS500906.3885181IPR017877Myb-like domain
PfamPF002496.9E-95180IPR001005SANT/Myb domain
CDDcd001675.65E-75481No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    Send to blast
MVQVKEFDGN LKEEGLVSLS PSVSGSTCDN AVLNLASLQG RMAGPIRRST KGGWTEEEDE  60
ILAHAVQKFN GRNWKKIGVY LHMTLFFFIS L*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G158400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT8934021e-102KT893402.1 Prunus persica cultivar Xiaobaitao Myb family transcription factor 3R-1 (MYB3R-1) mRNA, complete cds.
GenBankKT8934031e-102KT893403.1 Prunus persica cultivar Jinliuzaohong Myb family transcription factor 3R-1 (MYB3R-1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021817082.18e-46uncharacterized protein LOC110759336
TrEMBLA0A251QGJ83e-61A0A251QGJ8_PRUPE; Uncharacterized protein
STRINGEMJ206905e-46(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3751722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32730.13e-16Homeodomain-like protein