PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G201300.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 653aa    MW: 70487.9 Da    PI: 4.4835
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G201300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM103.62.5e-321682853128
                 NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                         pG++F+Pt+eelv +yLkk +egk+ ++ + i+ +d+++++P+dLp          yfFsk +  +++++r++r+t++g+ k+tgk +e++
  Prupe.2G201300.1.p 168 PGYKFSPTEEELVGFYLKKTIEGKDAKFRDRIPVIDVCNHKPSDLP---------EYFFSKPNYMNTNSNRRSRTTDEGFYKSTGKVREIK 249
                         9***************************999**************9.........4*********************************** PP

                 NAM  94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         ++ +++++g k++L +y+gr pk++kt+ vmhey+l
  Prupe.2G201300.1.p 250 AEqSQAVIGNKRILSYYEGRLPKAKKTKHVMHEYSL 285
                         98456679**************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100531.407166311IPR003441NAC domain
SuperFamilySSF1019416.28E-32167311IPR003441NAC domain
PfamPF023651.3E-17168285IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 653 aa     Download sequence    Send to blast
MAATTGSSSS SAAAADDPAL ALPSVLNVKL DPTNYPIWLA QIVPLLRSRR LISFVDGTSI  60
CPPAFLLGPD GKPSNAINPA YEDWIQMDQL VLSWINGSLS HPVLATVASS ISARATWLAL  120
AALLSTPVPV SDHGTAAMVG SGGCGSGGGE MSSSSTTGEG DSKQMDLPGY KFSPTEEELV  180
GFYLKKTIEG KDAKFRDRIP VIDVCNHKPS DLPEYFFSKP NYMNTNSNRR SRTTDEGFYK  240
STGKVREIKA EQSQAVIGNK RILSYYEGRL PKAKKTKHVM HEYSLTKTKL AQLGAQNNQQ  300
RELFLCHLTN KSAKSEKLKD DSICGDELAE PAIGSEISYN SEDDQAAATD MIQGPDEHLA  360
DKDVLVGTEN RNECAESESP NGFSPTDNND ISTCVCFGSP GSFDVPGGFF LSDFDDLFNE  420
PSCADLGENM DSTFISPEQL AATSATTPTS ATSFGGFGVG SPDGFLLSDF DDGFLLSDFD  480
VLFKEPFCAD QPDQPPHPPH PHQPSPAPHP HQPPSAPQSH QPPPPSQPQN YCSSTLPSAL  540
CTKQRNVPGL YNDDCSKQLS PTGNNISTNY HYEPVSNTAY GVQNGATDER FSEVYKTSTN  600
DHNESVSSEA YFQQEENLGS IFHPIWPQDY TPLSPMNTEL GDVMHASNYI GM*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-1416831717174Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G201300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020412475.10.0uncharacterized protein LOC18785806
TrEMBLA0A251QIQ90.0A0A251QIQ9_PRUPE; Uncharacterized protein
STRINGXP_008244238.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13710524
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.15e-26NAC transcription factor-like 9