PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G201800.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 456aa    MW: 51326.8 Da    PI: 4.4183
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G201800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM133.71.2e-41191512128
                 NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 
                          pGfrF Pt+e lv +yLkkk+egk  +++++i+e+d++k+eP d p+      +  +e ew+fFs+ d ky++++r nrat++g+ k tg
  Prupe.2G201800.1.p  19 LPGFRFYPTEEVLVGYYLKKKIEGKASNFSHIIPEIDVCKHEPCDVPAffeepDFPDHEMEWFFFSQPDFKYTNSTRCNRATDQGFYKITG 109
                         69***************************999***************6455554444788******************************* PP

                 NAM  88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         k +e++++ +++++g k+tL+fy+grapk++kt+W+mhey l
  Prupe.2G201800.1.p 110 KVREIKARrSKAVIGKKRTLTFYEGRAPKAKKTNWIMHEYYL 151
                         ******98566679**************************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.84E-4512177IPR003441NAC domain
PROSITE profilePS5100546.62118177IPR003441NAC domain
PfamPF023651.6E-2120150IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    Send to blast
MSSISRTTME EGDSVPVVLP GFRFYPTEEV LVGYYLKKKI EGKASNFSHI IPEIDVCKHE  60
PCDVPAFFEE PDFPDHEMEW FFFSQPDFKY TNSTRCNRAT DQGFYKITGK VREIKARRSK  120
AVIGKKRTLT FYEGRAPKAK KTNWIMHEYY LTNTELAQLG PNPNQQKDFV LCRLKNKSAN  180
YKKVKADSGG CIASNSEDDQ AAATDMISEP LEHLASQEVG DVLNGNGDHD ECTESPNGTG  240
LIDNNDISSC DDDEIDTWIF YDFDNQAACD LFQEYCAEPG ENLDSLLPPP QPPQPPLPPL  300
PQDCCSSTQQ SPLYTNQGNV PYVYDGDCNR QQSPIGDRNS YLTHKNNMSM NNQIEPVSNI  360
TYGVQNRATG ESNSEVNNNS TNDFKEPVSN ITCNFNNGAP NERISKACSQ PKENLESCFD  420
PFQLQDFMLL SPMNLELGDF EHDNKLYWHA MSCNL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-282018317174Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G201800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007220858.20.0protein NTM1-like 9 isoform X1
TrEMBLA0A251QIL20.0A0A251QIL2_PRUPE; Uncharacterized protein
STRINGXP_008244235.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13710524
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.12e-45NAC transcription factor-like 9