PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G201900.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 458aa    MW: 51160.4 Da    PI: 4.4292
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G201900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM88.31.4e-27141452128
                 NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                         ++G+r+hP++ee+v + Lkk+ egk  ++ ++i+ +d yk+eP++L          + + w+ Fs+ ++ky+++ r nr t++g+Wk tgk
  Prupe.2G201900.1.p  14 QRGLRYHPHEEEMV-NLLKKQEEGKASQARHIIPYIDFYKYEPRELAGlmlpDSPYQPRMWFSFSRPHHKYNNSPRCNRLTAKGFWKITGK 103
                         68************.99*********999999**************84344433336789******************************* PP

                 NAM  89 dkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                          +e++s+  +++++  k+tL+f+ gr +k +kt Wv +ey l
  Prupe.2G201900.1.p 104 PREIKSRqlSKSVTCKKRTLTFHLGRPSKWSKTGWVKQEYYL 145
                         ******976666677789**********************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-288165IPR003441NAC domain
PROSITE profilePS5100530.74113165IPR003441NAC domain
PfamPF023651.1E-1015144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 458 aa     Download sequence    Send to blast
MSSTTTEAWV LDLQRGLRYH PHEEEMVNLL KKQEEGKASQ ARHIIPYIDF YKYEPRELAG  60
LMLPDSPYQP RMWFSFSRPH HKYNNSPRCN RLTAKGFWKI TGKPREIKSR QLSKSVTCKK  120
RTLTFHLGRP SKWSKTGWVK QEYYLTSTVP GSNLSGLVLF RMKNKSAHYE SDTKQQQDVS  180
IFDESADPAI GGDMASDSQD DQAAANHMIP EAEEHLLGSG NHNDGEPGGF VSSDFDIMQE  240
LCAQLGLEPP QPHQLPQLGN VPGTGDYLAS NSDNQAAAIQ PMITDEEELL AYKELERVLL  300
DSGNPDNGEP GSCVSSDMRQ ESCAQPGEDL DSPVLSPRPP ELGNAPDVYT DECGSWPSQI  360
EDNDSSLPNK DNIPTNYDSK PISNTASDFE NQTKDERIPE VYSESEENLQ LFFRSLEVED  420
YTLPSSILYV EQGDVLHANN YIGCNESQDA ALFPQSS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-131117113174Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G201900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020414160.10.0NAC domain-containing protein 68 isoform X1
TrEMBLA0A251QIM10.0A0A251QIM1_PRUPE; Uncharacterized protein
STRINGEMJ220210.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1714827
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.13e-21NAC domain containing protein 96