PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.2G202700.3.p

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 388aa MW: 44837.3 Da PI: 4.3494

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.2G202700.3.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	142.5	2.4e-44	14	147	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka.....eekewyfFskrdkkyatgkrknratksgyWka 85 +p GfrFhPt+eelv++yLk+k +++++++ ++i+e+di+k++Pw++p ++++ ++ ew+fFs rd ky++++r+nrat +g Wk Prupe.2G202700.3.p 14 MPLGFRFHPTEEELVDYYLKNKRQDRDFNV-NHIPEIDICKYDPWEIPgLMFTEqdspyHDMEWFFFSLRDYKYTNSNRSNRATPHGSWKI 103 699*************************.88***********54333323344667************************* PP NAM 86 tgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 tgk++ + ++ +++++g+k+t++fy+ pk++kt+Wvmhey+l Prupe.2G202700.3.p 104 TGKERMIRARgSNAVIGTKRTMTFYERGVPKSKKTNWVMHEYNL 147 *****9666779************************87 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.96E-50	13	169	IPR003441	NAC domain
PROSITE profile	PS51005	48.746	14	171	IPR003441	NAC domain
Pfam	PF02365	1.6E-24	15	147	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence Send to blast
MGSKCYRKTE GDPMPLGFRF HPTEEELVDY YLKNKRQDRD FNVNHIPEID ICKYDPWEIP 60 GLMFTEQDSP YHDMEWFFFS LRDYKYTNSN RSNRATPHGS WKITGKERMI RARGSNAVIG 120 TKRTMTFYER GVPKSKKTNW VMHEYNLFES EASPDPQLAE RDFVLCRTKK NPDKKDTSVF 180 AEGEPSSYNL YNCEDEAAAD VTPESQDHSP STLQSPAYIE LGDVLQVNVL HEDCKDMQSP 240 FGDNDYSVTD KNYFSTFDEG EPHGFTVSDI ENEVACDMSQ EAQDYYSFTL PSPIYSELGS 300 VPHFDVYNNE WKSTYANFEN QTTDERISEE CPQPKENLRS ILSASQLEDY TSQTLMDTEE 360 YQMRPCEIGR EGAAGMNWEG SFFNIFP*

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence Send to blast

MGSKCYRKTE GDPMPLGFRF HPTEEELVDY YLKNKRQDRD FNVNHIPEID ICKYDPWEIP  60
GLMFTEQDSP YHDMEWFFFS LRDYKYTNSN RSNRATPHGS WKITGKERMI RARGSNAVIG  120
TKRTMTFYER GVPKSKKTNW VMHEYNLFES EASPDPQLAE RDFVLCRTKK NPDKKDTSVF  180
AEGEPSSYNL YNCEDEAAAD VTPESQDHSP STLQSPAYIE LGDVLQVNVL HEDCKDMQSP  240
FGDNDYSVTD KNYFSTFDEG EPHGFTVSDI ENEVACDMSQ EAQDYYSFTL PSPIYSELGS  300
VPHFDVYNNE WKSTYANFEN QTTDERISEE CPQPKENLRS ILSASQLEDY TSQTLMDTEE  360
YQMRPCEIGR EGAAGMNWEG SFFNIFP*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	1e-34	14	171	17	165	NO APICAL MERISTEM PROTEIN
1ut4_B	1e-34	14	171	17	165	NO APICAL MERISTEM PROTEIN
1ut7_A	1e-34	14	171	17	165	NO APICAL MERISTEM PROTEIN
1ut7_B	1e-34	14	171	17	165	NO APICAL MERISTEM PROTEIN
3swm_A	1e-34	14	171	20	168	NAC domain-containing protein 19
3swm_B	1e-34	14	171	20	168	NAC domain-containing protein 19
3swm_C	1e-34	14	171	20	168	NAC domain-containing protein 19
3swm_D	1e-34	14	171	20	168	NAC domain-containing protein 19
3swp_A	1e-34	14	171	20	168	NAC domain-containing protein 19
3swp_B	1e-34	14	171	20	168	NAC domain-containing protein 19
3swp_C	1e-34	14	171	20	168	NAC domain-containing protein 19
3swp_D	1e-34	14	171	20	168	NAC domain-containing protein 19
4dul_A	1e-34	14	171	17	165	NAC domain-containing protein 19
4dul_B	1e-34	14	171	17	165	NAC domain-containing protein 19
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.2G202700.3.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020411932.1	0.0	NAC domain-containing protein 83 isoform X5
TrEMBL	A0A251QIN2	0.0	A0A251QIN2_PRUPE; Uncharacterized protein
STRING	XP_008244181.1	1e-144	(Prunus mume)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17980.1	7e-46	NAC domain containing protein 71

Link Out ? help Back to Top
Phytozome	Prupe.2G202700.3.p