PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G204700.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 240aa    MW: 28315.3 Da    PI: 7.7434
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G204700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1385.9e-43291573128
                 NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkd 89 
                          GfrF+Pt+eelv++yL+kk ++k+++++++i+e+di+k+ePw+Lp    + ++  ++++fFs+rd ky +   r+nr+tk+g+Wk+tgk+
  Prupe.2G204700.1.p  29 CGFRFRPTEEELVNYYLRKKKQDKDFKVDHIIPEIDICKYEPWELPGlftEPESPYQDMFFFSPRDYKYINnRARTNRVTKRGFWKTTGKE 119
                         6***************************999***************6233333344588**********96378***************** PP

                 NAM  90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                         + ++   +   g kktL+fy+gr  + ++t+Wvmhey l
  Prupe.2G204700.1.p 120 RVIKG-ARGSNGRKKTLIFYEGRVTQCNRTNWVMHEYYL 157
                         *9999.77789**************************76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.62E-4521182IPR003441NAC domain
PROSITE profilePS5100545.77527182IPR003441NAC domain
PfamPF023652.6E-2430156IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MKYSFILLMP LQLLLTCYIH THTHTQMDCG FRFRPTEEEL VNYYLRKKKQ DKDFKVDHII  60
PEIDICKYEP WELPGLFTEP ESPYQDMFFF SPRDYKYINN RARTNRVTKR GFWKTTGKER  120
VIKGARGSNG RKKTLIFYEG RVTQCNRTNW VMHEYYLCED EAIPNPKLAQ QRDFVLCRLS  180
KKADKHETSI CAVAQPAYAE WVGNSEECSQ PEELELVFPA HQLQDNISGE MEFEISSKK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-342318213165NO APICAL MERISTEM PROTEIN
1ut4_B7e-342318213165NO APICAL MERISTEM PROTEIN
1ut7_A7e-342318213165NO APICAL MERISTEM PROTEIN
1ut7_B7e-342318213165NO APICAL MERISTEM PROTEIN
3swm_A8e-342318216168NAC domain-containing protein 19
3swm_B8e-342318216168NAC domain-containing protein 19
3swm_C8e-342318216168NAC domain-containing protein 19
3swm_D8e-342318216168NAC domain-containing protein 19
3swp_A8e-342318216168NAC domain-containing protein 19
3swp_B8e-342318216168NAC domain-containing protein 19
3swp_C8e-342318216168NAC domain-containing protein 19
3swp_D8e-342318216168NAC domain-containing protein 19
4dul_A7e-342318213165NAC domain-containing protein 19
4dul_B7e-342318213165NAC domain-containing protein 19
Search in ModeBase
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Expressed in roots, rosette leaves, cauline leaves, shoot apex, stems and flowers. {ECO:0000269|PubMed:17158162}.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). {ECO:0000250|UniProtKB:Q949N0}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G204700.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By cold, heat and drought stresses. {ECO:0000269|PubMed:17158162}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007219610.20.0NAC domain-containing protein 86
SwissprotB5X5703e-41NAC14_ARATH; NAC domain-containing protein 14
TrEMBLA0A251QJ370.0A0A251QJ37_PRUPE; Uncharacterized protein
STRINGXP_008233242.11e-140(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14450518
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.11e-43NAC 014