PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G230800.1.p
Common NamePRUPE_ppa011762mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 198aa    MW: 21608.4 Da    PI: 9.9842
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G230800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.60.00174769123
                        EEETTTTEEESSHHHHHHHHHHT CS
             zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                        ++C+ C++ F++   L  H  +H
  Prupe.2G230800.1.p 47 FECKTCNRQFPSFQALGGHRASH 69
                        89**********99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576677.2E-94569No hitNo description
PfamPF139123.4E-134671IPR007087Zinc finger, C2H2
SMARTSM003550.164769IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.8274774IPR007087Zinc finger, C2H2
PROSITE patternPS0002804969IPR007087Zinc finger, C2H2
SuperFamilySSF576677.2E-996123No hitNo description
PfamPF139121.3E-9100125IPR007087Zinc finger, C2H2
SMARTSM003550.61101123IPR015880Zinc finger, C2H2-like
PROSITE profilePS501578.933101128IPR007087Zinc finger, C2H2
PROSITE patternPS000280103123IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
MTMKRSITEM RELDRSLTMA NCLMLLSRGS HDHHQYDTFS ASPTRVFECK TCNRQFPSFQ  60
ALGGHRASHK KPRLMGSGDG NSSNGSDQSQ SQGSPPKPKT HECNICGLEF AIGQALGGHM  120
RRHRSALSNN NNTSQYSDSN SNSNSVSLSP QPAPMFQVLK KTNSGRRVMC LDLNLTPLEN  180
DLKILQIGKA APLVGFS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G230800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007218449.11e-145zinc finger protein ZAT12
TrEMBLM5XDR01e-144M5XDR0_PRUPE; Uncharacterized protein
STRINGEMJ196481e-144(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31634175
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28710.13e-39C2H2 family protein