PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G231300.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 210aa    MW: 23892.9 Da    PI: 9.0415
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G231300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.82e-32130188159
                         ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         ldDgy+WrKYGqK vk+s +prsYYrCt+++C+vkk+v+r ++d+++v++tYeg Hnh+
  Prupe.2G231300.1.p 130 LDDGYRWRKYGQKAVKNSLYPRSYYRCTHHTCSVKKQVQRLSKDTSIVVTTYEGVHNHP 188
                         59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.8E-33116188IPR003657WRKY domain
SuperFamilySSF1182901.83E-28123189IPR003657WRKY domain
PROSITE profilePS5081128.77125190IPR003657WRKY domain
SMARTSM007747.4E-38130189IPR003657WRKY domain
PfamPF031063.8E-26131188IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MEGHQEQYYP PPSTSSSLPL LPPHPSYLFP SSSTSMNPPP LPEPHHQQQA QLPDIDWVSL  60
LSGHHDHQIN NNEPAAMVEV NNNENNVIEA AQEEKGSNKR KGGEGRKISV MKKASRPRFA  120
FQTRSADDIL DDGYRWRKYG QKAVKNSLYP RSYYRCTHHT CSVKKQVQRL SKDTSIVVTT  180
YEGVHNHPCE KLMETLTPLL KQMQFLSRF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-24120187774Probable WRKY transcription factor 4
2lex_A2e-24120187774Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00317DAPTransfer from AT2G46130Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G231300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007219783.21e-158probable WRKY transcription factor 24
TrEMBLA0A251QLE71e-156A0A251QLE7_PRUPE; Uncharacterized protein
STRINGXP_008233664.11e-154(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32273471
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46130.12e-57WRKY DNA-binding protein 43