PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G264900.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 402aa    MW: 44162.2 Da    PI: 7.431
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G264900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.75.7e-29211271259
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                         +Dg++WrKYGqKe+ gs+fpr+YYrCt++   +Cp+kk+v+r ++dp ++e++Y+geH+++
  Prupe.2G264900.1.p 211 EDGFTWRKYGQKEIMGSRFPRGYYRCTHQklyNCPAKKQVQRLNNDPLTFEVMYRGEHTCH 271
                         7****************************999***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.1E-27207272IPR003657WRKY domain
SuperFamilySSF1182901.44E-25208272IPR003657WRKY domain
SMARTSM007744.9E-37210272IPR003657WRKY domain
PROSITE profilePS5081120.897211273IPR003657WRKY domain
PfamPF031061.8E-26211271IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MVHQHRSLTK AYIQLPFKFP HHHNMFKSKT SQKEPKQQLE AMDETTVSLI LHACKLARDL  60
ESNLPNLANQ PNLLSNSLDE ITRNFVTARE RVYGQDPSTS SSLHNMLTLA HQQQIGTSQV  120
QEWLRSSYAQ QAMDIIQTQL VADQKEVKIG GCIDDGDAEV KGLQAMDIVS ASDTNIASSS  180
SQRPRRRKDE GLISKITVPA PRIGNTEIPP EDGFTWRKYG QKEIMGSRFP RGYYRCTHQK  240
LYNCPAKKQV QRLNNDPLTF EVMYRGEHTC HMSATAPSVP PPSAEHHNAT QGSLAQTLAT  300
TTTTDPPTAS LWLSMDFNPI RGGSGSSSRM IGGDRGGGGG GSGDGAGTST TTRYGKEVDF  360
PVVDWADAMF NSGSSSSNSM DFIFHSAENK WESEDKKNGG Q*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A7e-18211270968OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1183187PRRRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00304DAPTransfer from AT2G40740Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G264900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020413675.10.0WRKY transcription factor 55
TrEMBLA0A251QLY20.0A0A251QLY2_PRUPE; Uncharacterized protein
STRINGEMJ222450.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF86293142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.11e-49WRKY DNA-binding protein 55