PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G272500.1.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 242aa    MW: 27069.2 Da    PI: 6.3093
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G272500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.19e-18147197255
                 AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                         +y+GVr+++ +g+++AeIrdp     k +r++lg+f+t  +Aaka++ a+ kl+g
  Prupe.2G272500.1.p 147 HYRGVRRRP-WGKYAAEIRDP---ArKGTRVWLGTFDTDVDAAKAYDCAAFKLRG 197
                         7********.**********8...4445**********99*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.6E-31146206IPR001471AP2/ERF domain
CDDcd000182.03E-30147205No hitNo description
SMARTSM003801.1E-36147211IPR001471AP2/ERF domain
PROSITE profilePS5103224.526147205IPR001471AP2/ERF domain
PfamPF008471.7E-12147197IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-22147206IPR016177DNA-binding domain
PRINTSPR003673.7E-13148159IPR001471AP2/ERF domain
PRINTSPR003673.7E-13187207IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MHANQLSCSH IKIATPTHEE QDESTLELIR QHLLGDFTFT DGFFSHPNFQ IPDDDFSYDF  60
QPLVVKPECS LSESESTSPI SDPHCHNPQP CNFETKPETI ISPSIKVEPL NLSSPTKGKT  120
TTSDCATPSS PDDKFQQVSG SGEVLRHYRG VRRRPWGKYA AEIRDPARKG TRVWLGTFDT  180
DVDAAKAYDC AAFKLRGRKA ILNFPLEAGQ SSQPPVNTSR KRRRSVKQEE EELPETELLK  240
P*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A6e-29146206161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A8e-29146206464ATERF1
3gcc_A8e-29146206464ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1219223RKRRR
2219224RKRRRS
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G272500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT3695470.0KT369547.1 Prunus pseudocerasus AP2/EREBP family transcription factor-like protein 15 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007219565.21e-180ethylene-responsive transcription factor ERF106
TrEMBLA0A251QMB61e-179A0A251QMB6_PRUPE; Uncharacterized protein
STRINGEMJ207641e-168(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF52573056
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.15e-43ERF family protein