PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G289800.1.p
Common NamePRUPE_ppa023185mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family ARR-B
Protein Properties Length: 527aa    MW: 58123.5 Da    PI: 9.4773
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G289800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like77.81.3e-24210263155
             G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                         kp+++Wt+ LH++F+ a++++ G +kA+Pk+ile+m+v+gLt+e+v+SHLQkYR+
  Prupe.2G289800.1.p 210 KPKVVWTNSLHNQFLLAIRHI-GLDKAVPKRILEFMNVPGLTRENVASHLQKYRI 263
                         79*******************.********************************6 PP
2Response_reg77.16.3e-26271351109
                         EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHH CS
        Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalea 89 
                         +l+vdD+ + + ++  +l+   y +v +++++ +al++l++++  +Dl+++D+ mp+m+G+el k+ +ee  klp+i+++a ++e+ +l+ 
  Prupe.2G289800.1.p  27 ILVVDDDATTLAIVSAMLKTWSY-QVVSVRNPIDALATLRARKgiFDLVVTDLHMPQMNGFELQKHVHEEF-KLPVIMMSADDKESVILKS 115
                         89*********************.9999***********99999*************************99.******************* PP

                         HHTTESEEEESS--HHHHHH CS
        Response_reg  90 lkaGakdflsKpfdpeelvk 109
                         l+ G+  +++Kp++++++ +
  Prupe.2G289800.1.p 116 LEGGVVYYIVKPVSKDDIKN 135
                         ****************9976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521722.13E-3323142IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23002.0E-3524148No hitNo description
SMARTSM004486.7E-2825137IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011039.2726141IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.3E-2227135IPR001789Signal transduction response regulator, receiver domain
CDDcd001561.66E-2728140No hitNo description
SuperFamilySSF466898.06E-19207267IPR009057Homeodomain-like
PROSITE profilePS5129410.115207266IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.8E-25208267IPR009057Homeodomain-like
TIGRFAMsTIGR015574.3E-25210263IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 527 aa     Download sequence    Send to blast
MDAATERSEF RQSSANTKPS FVDMINILVV DDDATTLAIV SAMLKTWSYQ VVSVRNPIDA  60
LATLRARKGI FDLVVTDLHM PQMNGFELQK HVHEEFKLPV IMMSADDKES VILKSLEGGV  120
VYYIVKPVSK DDIKNVWQYA VAAKKGKSVT IEEIESAPGE APGEVEDGSS ETSSDTDEEK  180
QDKKAEAKVK RARKRHREDD NEERMVAPKK PKVVWTNSLH NQFLLAIRHI GLDKAVPKRI  240
LEFMNVPGLT RENVASHLQK YRIFLKRVAE KARLSKCLSE RVFRSSFAFG HPALVFNNVQ  300
RDQYYSQLLN PQQMGTSIAS TFQPSAGNGS TLALTAAASN NLGSIQFPNY HQSSSSNSSR  360
SFPQLIGSGQ SRLLSNNQAN ILCQQPMLGN GNGDQLLCQA NRRTAAFGVQ QLMNTFGNGG  420
MSFGLMNNNI GTNSLMQVYP QQSQPRQNGV FTFTNNPFSY NFATSGNQNS SSYTPLSSSF  480
ENMGSNVNNV NQRVPNSSHQ LVSNFAVSQI MSSSGRELVG LMGSQPA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A3e-22207269264ARR10-B
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G289800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007220738.20.0two-component response regulator ARR1
TrEMBLA0A251QN380.0A0A251QN38_PRUPE; Uncharacterized protein (Fragment)
STRINGEMJ219370.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101422534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.18e-62response regulator 2