PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G297500.1.p
Common NamePRUPE_ppa002336mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 701aa    MW: 77271.7 Da    PI: 8.0997
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G297500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.000137697223
                        EETTTTEEESSHHHHHHHHHHT CS
             zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                        kC +C++ F ++ n++rHir+H
  Prupe.2G297500.1.p 76 KCDKCPREFCSSINYRRHIRVH 97
                        7********************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015710.03475102IPR007087Zinc finger, C2H2
PROSITE patternPS0002807798IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 701 aa     Download sequence    Send to blast
MPIAKLKASN TLDAMKSEEG NDSLDTIIRQ VAKEPSISFS RAGDSPVPWI QLLHALDQQE  60
LPGWPLHSPI KVQLQKCDKC PREFCSSINY RRHIRVHHRL KKLDKDSSKN RELLGAFWDK  120
LSPEEAKEAA SFKNVTLEEV PGSSIIKALT THIRKPGFSS MPHIYLKAGS ALLDIVQARP  180
SRFPISSQEL FSILDDASEK TFLSGTAISM QRYIFDGEAG KVGLESKNLV ACTSFLVEQK  240
LVKAWHADKD AEALRLQKLL VEEEEAAQRR QAELMERKRQ KKLRQKEQKA KDQRHGVKVN  300
VKENIDETLE AEPLVETSSP SATFDSDTTS SDVQAHDSLS LEAFQLSTAD ENVDPESQTE  360
FIHGHTDSVS GPNVERRMVQ GSGCRRAVVA RWQVLSKSQR GVPNGFHGGQ SSQTSKLSSI  420
QNHGNHRDSR AASSGNKVWS RKPKPEYDGG SLKAGVQKEA TEPDQIKNQE VLIGSISVNL  480
GNCSQESDNL AGVDDDCLLE HQIPKNNAHD KTNKPDLVHS GTNRSTVKLW RPVSRHGTKG  540
PMAIQNGNRA SEIDVVAEKG NSQNPSSENC PRSCVMDGGK DGNGNGSTHL DETGSLRFSC  600
RAAKDFLAQR WKEAIAADHV ELVLLQDSEP PRCPDNQNDG EVESSHSLKF KRSILGNAEN  660
RLVNVEGLEV PTAGAAKVKY RTKPEKGLKI KYIPKQSTVT *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1275282ERKRQKKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G297500.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007218943.20.0uncharacterized protein LOC18786776
TrEMBLA0A251QNF60.0A0A251QNF6_PRUPE; Uncharacterized protein
STRINGXP_008234210.10.0(Prunus mume)
STRINGEMJ201420.0(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45172739
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25610.11e-139C2H2-like zinc finger protein