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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Prupe.2G299400.1.p |
| Common Name | PRUPE_ppa002688mg |
| Organism |
|
| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
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| Family |
GRAS |
| Protein Properties |
Length: 646aa MW: 70121.6 Da PI: 7.1882 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Prupe.2G299400.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 341.8 | 1.2e-104 | 274 | 645 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90
++ L+e+A+a+s+g+ e+a ++L+rl + +p+ ++ qRl +++ AL++r++ + + p++e s+e++ +++l++e+sP+
Prupe.2G299400.1.p 274 KQSLMEAATAISEGKSEAAAEILTRLTTSqvPNPRPNSEQRLLEVMALALKSRVNP----VDNPPPVTE---LFSQEHAGSTQLLYELSPC 357
578**********************988744677779******************9....443333333...3499*************** PP
GRAS 91 lkfshltaNqaIleavege....ervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpf 176
++f++++aN aIlea+ ++ ++vH+iDfdi+qG+Q++ LlqaL +Rp+g p +++iT+v++ +g +++l ++++L+k+A++ gv +
Prupe.2G299400.1.p 358 FRFGFMAANLAILEATLTDksatNKVHVIDFDIGQGGQYVLLLQALCARPNGLPaTVKITTVAD--NGGEDRLTMVRQNLSKVAKQHGVVL 446
***************9777678899*************************997769********..77*********************** PP
GRAS 177 efnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysal 267
efn+ v+++l++l+ e+L ++p+E +aVn++++l++++desvs++++rde+L+ vk+lsP+vv++veqe+++n+++F++r+ e++ yy al
Prupe.2G299400.1.p 447 EFNI-VSQKLAELNRESLGCEPDEPIAVNFAFKLYSMPDESVSTDNPRDELLRRVKGLSPRVVTLVEQELNTNTAPFMARVNETCGYYGAL 536
***9.8************************************************************************************* PP
GRAS 268 fdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk...sdgyrveees 355
++s++++ + +++er+k E++ l+r++ n vaceg++r+er+e ++kWr+r+++aGF+ p+s+++++ k lr + + g++v+ee+
Prupe.2G299400.1.p 537 LESIKSTDAGDNSERVKAEEA-LSRKLINSVACEGRDRVERCEVFGKWRARMGMAGFELRPMSQNVTEVLKQRLRSGNnrvNSGFTVKEEN 626
****88889999*********.********************************************999999998654335689******* PP
GRAS 356 gslvlgWkdrpLvsvSaWr 374
g +++gW +r+L+++SaWr
Prupe.2G299400.1.p 627 GGVCFGWISRTLTVASAWR 645
******************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 646 aa
Download sequence Send
to blast |
MQSGFTGGAG AGGVPDFYAG GRSISIATAM NNHHQHPSQP PYHRSSLPGL FLDAPSSQIA 60
RQTQSQSQFQ TQNPSTLIGK RTLAEFQAHQ QQHHYHNPNQ NLYLRSLKPR TFQHSSPISP 120
LSPIDFSSSS TITGSDSSSS ASSLLSHQRF GLPLLQLRPQ PVHQTLPPAG SFVNNNPVQN 180
QTRVVSGVDS EKKMISNRLQ ELEKQLLDDN DEEDEGDAVS VITKTSSEWS QTIQNLIGPG 240
PGPGQNQKPV SPSPTSSSSS SSSVASPASS TCSKQSLMEA ATAISEGKSE AAAEILTRLT 300
TSQVPNPRPN SEQRLLEVMA LALKSRVNPV DNPPPVTELF SQEHAGSTQL LYELSPCFRF 360
GFMAANLAIL EATLTDKSAT NKVHVIDFDI GQGGQYVLLL QALCARPNGL PATVKITTVA 420
DNGGEDRLTM VRQNLSKVAK QHGVVLEFNI VSQKLAELNR ESLGCEPDEP IAVNFAFKLY 480
SMPDESVSTD NPRDELLRRV KGLSPRVVTL VEQELNTNTA PFMARVNETC GYYGALLESI 540
KSTDAGDNSE RVKAEEALSR KLINSVACEG RDRVERCEVF GKWRARMGMA GFELRPMSQN 600
VTEVLKQRLR SGNNRVNSGF TVKEENGGVC FGWISRTLTV ASAWR*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in seedlings, roots, leaves and siliques. {ECO:0000269|PubMed:10341448, ECO:0000269|PubMed:18500650}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
