PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Prupe.2G314800.2.p

Organism

Prunus persica

Taxonomic ID

3760

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 288aa MW: 31501.4 Da PI: 7.1786

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Prupe.2G314800.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	44.1	4.5e-14	40	67	36	62
zf-Dof 36 C.rryWtkGGalrnvPvGggrrknkkss 62 C rryWt+GG+lrnvPvGgg+rkn+k+s Prupe.2G314800.2.p 40 CpRRYWTEGGSLRNVPVGGGSRKNNKRS 67 549*********************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	7.0E-9	20	59	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.7E-8	40	65	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence Send to blast
MDTAHWPQGF GVVKSMEDSS PSRPILERRA RPQKDQALNC PRRYWTEGGS LRNVPVGGGS 60 RKNNKRSNSS SPSTSSAKKV AHDHHNHVTT NTPHGNFPQH HDSASQNPKI HFQGQDLNLA 120 YPPTDQEYDQ VLPFSIDNKS QHQLNPSSST TTSSHHHHLS AMELLKTGIA SRGLASFMPM 180 GVPDHSNNNN NNNITMFSTG FPMGVQEFKP SHGLSFSLDG FESSGYGCLQ GVQEANNSHA 240 RLLFPTDEDL KQQIPSTTTI TTEFDQHTRG EGDSGGYWNG MLGGGSW*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Prupe.2G314800.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020413971.1	0.0	dof zinc finger protein DOF4.6 isoform X1
TrEMBL	A0A251QPF1	0.0	A0A251QPF1_PRUPE; Uncharacterized protein
STRING	XP_008234696.1	0.0	(Prunus mume)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	4e-23	Dof family protein

Link Out ? help Back to Top
Phytozome	Prupe.2G314800.2.p