PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G317500.3.p
Common NamePRUPE_ppa024293mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family GRF
Protein Properties Length: 520aa    MW: 56426 Da    PI: 8.2947
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G317500.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC77.41.4e-24130173144
                 WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 
                         d+epgrC+RtDGKkWRCsr+v +++k+CErH+hrgr rsrk++e
  Prupe.2G317500.3.p 130 DPEPGRCKRTDGKKWRCSRDVAPDQKYCERHMHRGRPRSRKHVE 173
                         79****************************************98 PP
2QLQ56.48.8e-2070104236
                 QLQ   2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 
                         +FT++Q+ +L++Q+++yKy++a++PvP +Ll++i 
  Prupe.2G317500.3.p  70 PFTNTQWKELERQAMIYKYMVASLPVPRDLLFPIN 104
                         8********************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009515.5E-1169105IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166621.17470105IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088801.4E-1370103IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166725.586130174IPR014977WRC domain
PfamPF088791.6E-20131173IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010114Biological Processresponse to red light
GO:0010218Biological Processresponse to far red light
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 520 aa     Download sequence    Send to blast
MMMVHRDNHR RPFSSSERVA AAAGSSSSGG PVLRGLQPFD ISNITTNTSI SAHHTAFRSP  60
GGMTTSLGFP FTNTQWKELE RQAMIYKYMV ASLPVPRDLL FPINRAPSGP TISQSPLSSG  120
FNLRLSNSTD PEPGRCKRTD GKKWRCSRDV APDQKYCERH MHRGRPRSRK HVEVHANTTT  180
KRVRHDINQA PPTMSPATVS ISNTTSINKN VCQTQFIGST LQPYHQSPMF LDRDTVKAAT  240
FDSMNSASSD REPRSLDWLM MKGEPVQMAT SDPQWQHLMQ SKTELNSKIP FFDANSSIFA  300
QRSENECFLN LNSYTNFNAG GEDQPDNECN MFLNPDVVSL DNPLLEETPR CFIDAWSKTV  360
INEDTMANSV NNKDNSSAPS SGQLSPSSLT LSMGGYNSIN EEMGQTQMSL GNNGNGMKPG  420
LSTWLSPPSW VASAPGGPLA EVLKPTTSAA SNPSSPITAA TANGELGSPL ATTVSSPSGV  480
LQKTFASLSD SSGNSSPTLA SSRAKQPEIV SLWLNQNKA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G317500.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150352e-33AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020411995.10.0growth-regulating factor 7 isoform X3
TrEMBLA0A251QQN70.0A0A251QQN7_PRUPE; Uncharacterized protein
STRINGEMJ221580.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53660.13e-37growth-regulating factor 7