PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G317500.4.p
Common NamePRUPE_ppa024293mg
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family GRF
Protein Properties Length: 471aa    MW: 51264.4 Da    PI: 7.179
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G317500.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC77.61.2e-2481124144
                 WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 
                         d+epgrC+RtDGKkWRCsr+v +++k+CErH+hrgr rsrk++e
  Prupe.2G317500.4.p  81 DPEPGRCKRTDGKKWRCSRDVAPDQKYCERHMHRGRPRSRKHVE 124
                         79****************************************98 PP
2QLQ56.67.7e-202155236
                 QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
                        +FT++Q+ +L++Q+++yKy++a++PvP +Ll++i 
  Prupe.2G317500.4.p 21 PFTNTQWKELERQAMIYKYMVASLPVPRDLLFPIN 55
                        8********************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009515.5E-112056IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166621.1742156IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088801.3E-132154IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166725.58681125IPR014977WRC domain
PfamPF088791.4E-2082124IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010114Biological Processresponse to red light
GO:0010218Biological Processresponse to far red light
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    Send to blast
MFDNIHVLCI AGGMTTSLGF PFTNTQWKEL ERQAMIYKYM VASLPVPRDL LFPINRAPSG  60
PTISQSPLSS GFNLRLSNST DPEPGRCKRT DGKKWRCSRD VAPDQKYCER HMHRGRPRSR  120
KHVEVHANTT TKRVRHDINQ APPTMSPATV SISNTTSINK NVCQTQFIGS TLQPYHQSPM  180
FLDRDTVKAA TFDSMNSASS DREPRSLDWL MMKGEPVQMA TSDPQWQHLM QSKTELNSKI  240
PFFDANSSIF AQRSENECFL NLNSYTNFNA GGEDQPDNEC NMFLNPDVVS LDNPLLEETP  300
RCFIDAWSKT VINEDTMANS VNNKDNSSAP SSGQLSPSSL TLSMGGYNSI NEEMGQTQMS  360
LGNNGNGMKP GLSTWLSPPS WVASAPGGPL AEVLKPTTSA ASNPSSPITA ATANGELGSP  420
LATTVSSPSG VLQKTFASLS DSSGNSSPTL ASSRAKQPEI VSLWLNQNKA *
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G317500.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150352e-33AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020411993.10.0growth-regulating factor 7 isoform X1
RefseqXP_020411995.10.0growth-regulating factor 7 isoform X3
TrEMBLA0A251QPJ80.0A0A251QPJ8_PRUPE; Uncharacterized protein
STRINGXP_008234659.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53660.12e-36growth-regulating factor 7