PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G320600.2.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 438aa    MW: 49480.1 Da    PI: 4.8325
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G320600.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.79.7e-53141411128
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                         lp GfrF+Ptdeel+++yL+ k++g++ ++ +vi+e+d++k+ePwdLp  + +++++ ew+fF+++d+ky++g+r nrat +gyWkatgkd
  Prupe.2G320600.2.p  14 LPLGFRFRPTDEELIDYYLRSKINGNHKQV-TVIREIDVCKWEPWDLPdlSVIQTTDPEWFFFCPQDRKYPNGHRLNRATGKGYWKATGKD 103
                         699************************999.99**************96447778888********************************* PP

                 NAM  90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                         ++++s  + l+g+kktLvf++grapkg++t+Wvmheyr 
  Prupe.2G320600.2.p 104 RQIKS-ATILIGMKKTLVFHTGRAPKGKRTNWVMHEYRT 141
                         *****.999****************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.02E-617164IPR003441NAC domain
PROSITE profilePS5100555.98414164IPR003441NAC domain
PfamPF023658.8E-2815140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0002230Biological Processpositive regulation of defense response to virus by host
GO:0002237Biological Processresponse to molecule of bacterial origin
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0003713Molecular Functiontranscription coactivator activity
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    Send to blast
MLVVDMAVLS TNTLPLGFRF RPTDEELIDY YLRSKINGNH KQVTVIREID VCKWEPWDLP  60
DLSVIQTTDP EWFFFCPQDR KYPNGHRLNR ATGKGYWKAT GKDRQIKSAT ILIGMKKTLV  120
FHTGRAPKGK RTNWVMHEYR TTQKELDGTN PGQNPFVLCR LFKKQDETID DSNFAEVEPA  180
VSSSTAAISS PQDTQSDHAL GPTSPSFERL DEKPTKVECT IADYSNGMEP DTLQPVECPS  240
NTYNGYDAED QLNVPLEGLD MFYDPPQQPL FSPLHSQMQT ELYYCGSNNF NNGHQGVKIQ  300
YGTNDQDADI SEFLSSIFNS SGEHSDVDAF VAVPCETELQ NPVQSEGNID RKGPVQNEST  360
QIDCFLTGDA GTGIRLRTRE TQNPTSTENF ARQGDAPRRL RLQRKFEVLH CCNLSKDWNC  420
RPEDQETKPM AVEVRSL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-46916512166NO APICAL MERISTEM PROTEIN
1ut4_B1e-46916512166NO APICAL MERISTEM PROTEIN
1ut7_A1e-46916512166NO APICAL MERISTEM PROTEIN
1ut7_B1e-46916512166NO APICAL MERISTEM PROTEIN
3swm_A1e-46916515169NAC domain-containing protein 19
3swm_B1e-46916515169NAC domain-containing protein 19
3swm_C1e-46916515169NAC domain-containing protein 19
3swm_D1e-46916515169NAC domain-containing protein 19
3swp_A1e-46916515169NAC domain-containing protein 19
3swp_B1e-46916515169NAC domain-containing protein 19
3swp_C1e-46916515169NAC domain-containing protein 19
3swp_D1e-46916515169NAC domain-containing protein 19
4dul_A1e-46916512166NAC domain-containing protein 19
4dul_B1e-46916512166NAC domain-containing protein 19
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.146760.0fruit
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.2G320600.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020412062.10.0NAC domain-containing protein 91
TrEMBLA0A251QPP90.0A0A251QPP9_PRUPE; Uncharacterized protein
STRINGXP_008234624.10.0(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24590.21e-115TCV-interacting protein