PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G078800.4.p
Organism
Prunus persica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family CPP
Protein Properties Length: 621aa    MW: 68237.2 Da    PI: 7.9672
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G078800.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR47.92.7e-15347385341
                 TCR   3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 
                         +k+CnC++skClk+YCeCfaag++C ++C C +C Nk e
  Prupe.3G078800.4.p 347 CKRCNCRRSKCLKLYCECFAAGVYCVDSCACVNCYNKPE 385
                         89**********************************975 PP
2TCR52.69e-17433471139
                 TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 
                         ++k+gCnCkkskClk+YCeCf+a++ Cs+ C+Ce+CkN+
  Prupe.3G078800.4.p 433 RHKRGCNCKKSKCLKRYCECFQAKVGCSSACRCEGCKNT 471
                         589***********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011141.0E-15345386IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163435.241346473IPR005172CRC domain
PfamPF036381.8E-11348383IPR005172CRC domain
SMARTSM011141.2E-16433474IPR033467Tesmin/TSO1-like CXC domain
PfamPF036381.4E-12435471IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 621 aa     Download sequence    Send to blast
MFGSPENEAV LLSDQAEKNL PLSSLEMSQA AINQRDGKKT EELSRFIFEK VKESDVNACL  60
VSRAQNCGEN AAKLHRAGCQ YDEKNASSQS REDSNECKQR VQKGFVKEGG QNERGIRRHL  120
QFEAAKAYKF TILGNSESPN SLTHDATNSR SPSILTNLKS LASSHFDNRA SSSLQDVSCD  180
TLQFPSSPYE SFTSAQIGVN STTSAPIHSV IGLHLNRISR STSLSSDIFS SKKSIGYLSM  240
PEQMLEHGSN NIATNSSSIL TSAVSGKIYV HVASGQQESQ AVTEANSFTF HSTDTMKPPC  300
HSMLVDQETA PCEVGMSASQ ETDEVEELNQ LSPKRKRRRD AYMSEGCKRC NCRRSKCLKL  360
YCECFAAGVY CVDSCACVNC YNKPEFEDTV LDIRQQIEAR NPLAFTPKVV DNAIDSSPNF  420
TEEQDLTTPS SARHKRGCNC KKSKCLKRYC ECFQAKVGCS SACRCEGCKN TFGVTPEPVY  480
NRAKKWEAHP AEKLDNVKGA IACIKAPAFS SASSSNSAKI PQAQLPSSQL QPSGAHYDIP  540
YDDTPEILEE TSNPTKVVRA SSPNQKRVSP PQSRSRLRER SPTGLRSGRK FILQAMPSFP  600
PLTPHRNSKE GTNEIENDDK *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A9e-1834847712126Protein lin-54 homolog
5fd3_B9e-1834847712126Protein lin-54 homolog
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1333338KRKRRR
2334338RKRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapPrupe.3G078800.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020414498.10.0protein tesmin/TSO1-like CXC 3 isoform X7
TrEMBLA0A251PX070.0A0A251PX07_PRUPE; Uncharacterized protein
STRINGEMJ178940.0(Prunus persica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14770.19e-61TESMIN/TSO1-like CXC 2